DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Leash and arrd-11

DIOPT Version :10

Sequence 1:NP_650037.2 Gene:Leash / 41320 FlyBaseID:FBgn0037856 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_496883.2 Gene:arrd-11 / 187635 WormBaseID:WBGene00011052 Length:423 Species:Caenorhabditis elegans


Alignment Length:486 Identity:112/486 - (23%)
Similarity:183/486 - (37%) Gaps:105/486 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MESERLRITLDSADRVYFAGDIIRGEIWMN-VNKRTKIRAIKVQVTGKGKCKWMEI--LRK--NS 60
            |....|.:..|..:.|:|.|..|.|.:.:: ..::.|.||:.:::.|.....|.:.  :|:  |.
 Worm     1 MPETELHVIFDQPNEVFFPGQPISGRVVLSTTEEKYKARAVNIKILGLAHTSWTDYDSVRRVDND 65

  Fly    61 NNNEY-SRSLFYTSKEVYEHSETPLPDFEPRGLELSAGEHTFIFEVALGRQLPSSFKGSYGAIKY 124
            .|..| |.|:.|:|...|......|...:....|||||::.:.|...|...:|.||:|.||.::|
 Worm    66 GNVRYDSESVHYSSNVHYLDQALLLWACKDGSNELSAGDYVWPFSYTLPLNVPPSFEGKYGYLRY 130

  Fly   125 KMRVLIQRPWTFDERHTIPFTVVKNMPLQPMQRSIPSSL-----EKQVTKTISLFGTRPITLLAL 184
            .:...:.|||..|:......||   .||..: .:||.:|     |:........|....:.|...
 Worm   131 SVTAEVDRPWRLDKAKRRCITV---SPLIDL-NAIPLALTPIDDEESENLGCCFFRKGYLELRVN 191

  Fly   185 LPEDFAVRGEPLRICATVINNSTTAVEKLRFTVLQ---YVTYYSHVPLRVQ-------------- 232
            :|:...|.||.:.:...::|:|:..|.:::..::|   ::.|.:....|..              
 Worm   192 IPKTGFVPGETVPMNIHILNHSSVPVTEVKAKIIQQCKFIAYRNGTIFRFDGGSDTLMSGSSQQT 256

  Fly   233 KVECIAVATK-ETGSVQKKTERSFAHELLLPDGAQPTDEQMSGVITIVY--ELRVE------AVL 288
            |.:...|.|: :..:|....|..|..|..|| ...||..:.|.|||:.|  ::|||      :..
 Worm   257 KYDTKPVITQTQPMTVTPGNEHKFVLEFRLP-SVTPTICRFSPVITVEYVVQVRVETTSTCGSAA 320

  Fly   289 RGFFKNLILNLPFKVYSQDPSNRQSSLRPPPPPRPNDGPPGPELGSGNLFEPALPVYPSLDSSIG 353
            :.....||..:|.:.|.             |||.||:.|.|......||.:..:|          
 Worm   321 KCEMPILIGTVPIRNYL-------------PPPIPNNYPIGLPPPYANLTDVNVP---------- 362

  Fly   354 SPSHSSQFSECSSINSITSDSSAATLSPAVGAGTGGMDMSYTSGSQSSQYGSPSARTSLRSSNVP 418
                      |                |:.|:||..:..:.....|.|.||..........:..|
 Worm   363 ----------C----------------PSGGSGTAVIPSAPPPSYQESMYGVGGTELRAEENEKP 401

  Fly   419 YMPYSSSPLMVQSYP-----PPHLPAYPPPE 444
            :.|         .||     |.:.|..||.|
 Worm   402 FAP---------KYPVFNNLPIYNPTAPPSE 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LeashNP_650037.2 Arrestin_N 6..152 CDD:451447 42/151 (28%)
Arrestin_C 191..308 CDD:214976 32/142 (23%)
arrd-11NP_496883.2 Arrestin_N 6..159 CDD:425619 44/156 (28%)
Arrestin_C 182..332 CDD:214976 32/150 (21%)

Return to query results.
Submit another query.