DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Leash and arrd-19

DIOPT Version :10

Sequence 1:NP_650037.2 Gene:Leash / 41320 FlyBaseID:FBgn0037856 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_503917.1 Gene:arrd-19 / 178764 WormBaseID:WBGene00018061 Length:471 Species:Caenorhabditis elegans


Alignment Length:528 Identity:117/528 - (22%)
Similarity:191/528 - (36%) Gaps:141/528 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MESERLRITLDSADRVYFAGDIIRGEIWMNVNK-RTKIRAIKVQVTGKGKCKWMEILRKNSNNNE 64
            |....|.:..:..|.|:..|..|.|.:.::..| :.|.||:.:::.|.....|.:..|....|.|
 Worm     1 MPDTELHVIFNQPDEVFHPGKPISGRVVLSTTKEKYKARAVNIKILGLAHTSWTDTERVRKVNAE 65

  Fly    65 YSRSLFYTSKEVYEHSETPLPDFEPR----------------GLELSAGEHTFIFEVALGRQLPS 113
                    .||.|   ||.:.::...                ..||:|||:.:.|...|...:|.
 Worm    66 --------GKETY---ETKIVNYSANVNYLDYSLLLWASSDGSNELAAGEYAWPFSYTLPINVPP 119

  Fly   114 SFKGSYGAIKYKMRVLIQRPWTFDERHTIPFTVVKNMPLQPMQRSIPSSLEKQVTKTIS--LFGT 176
            ||:|.||.::|.:...|.|||..|:......||...:.|..:..:: :.:..|.::.:.  .|..
 Worm   120 SFEGKYGYLRYSVTAEIDRPWRVDKDKKRCITVSPLIDLNVIPHAL-TQINDQASENLGCCCFTK 183

  Fly   177 RPITLLALLPEDFAVRGEPLRICATVINNSTTAVEKLRFTVLQ---YVTYYSHVPLRVQKVECIA 238
            ..:.|...:|:...|.||.:.:...::|:|:..|.|::..::|   ::.|.:...:....    .
 Worm   184 GYLELRVNIPKTGFVPGETVPMNIHILNHSSVPVTKVKAKIIQQCKFIAYRNGTTVTYDG----G 244

  Fly   239 VATKETGSVQK-------------------KTERSFAHELLLPDGAQPTDEQMSGVITIVY--EL 282
            ..|..:|.:|:                   :.|..||.||.|| ...||..|.|.|||:.|  :.
 Worm   245 YETSTSGMLQETQHDTRTVVKQGLEMKVAPRNEHKFAMELRLP-SVTPTINQFSPVITVEYIVQF 308

  Fly   283 RVE-------------AVLRGFFKNLILNLPFKVYSQDPSNRQSSLRPPPPPRPNDG-------- 326
            .||             ::|.|... :...||...|.|||:      .||..|.|..|        
 Worm   309 HVETSTTCGGNVDCEMSILIGTVP-ISKYLPPAYYPQDPN------LPPSQPTPIGGGVAPAGVA 366

  Fly   327 ------PP---------GPELGSGNLFEPALPVYPSLDSSIGSPSHSSQFSECSSINSITSDSSA 376
                  ||         |.:.|:|:...|..|.||   |.:.:|..|..           .....
 Worm   367 PAGVVPPPGYGFLPMTDGTDNGAGDTPYPVGPPYP---SDVPAPYPSGD-----------EPKDG 417

  Fly   377 ATLSPAVGAGTGGMDMSYTSGSQSSQYGSPSARTSLRSSNVPYMPYSSSPLMVQSYP-----PPH 436
            ..:.|:      ...:||    :.|.||:.....:...:..|:.|         .||     |.:
 Worm   418 TVVVPS------APPLSY----EESMYGTEGTELNTDENAQPFAP---------KYPVFNDLPVY 463

  Fly   437 LPAYPPPE 444
            .|..||||
 Worm   464 NPTAPPPE 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LeashNP_650037.2 Arrestin_N 6..152 CDD:451447 41/162 (25%)
Arrestin_C 191..308 CDD:214976 35/153 (23%)
arrd-19NP_503917.1 Arrestin_N 6..159 CDD:425619 41/163 (25%)
Arrestin_C 182..332 CDD:214976 33/154 (21%)
PHA03247 <338..470 CDD:223021 35/170 (21%)

Return to query results.
Submit another query.