DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Leash and arrd-17

DIOPT Version :10

Sequence 1:NP_650037.2 Gene:Leash / 41320 FlyBaseID:FBgn0037856 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_499816.2 Gene:arrd-17 / 176799 WormBaseID:WBGene00011732 Length:426 Species:Caenorhabditis elegans


Alignment Length:431 Identity:101/431 - (23%)
Similarity:171/431 - (39%) Gaps:82/431 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MESERLRITLDSADRVYFAGDIIRGEIWMNVNKRTKIRAIKVQVTGKGKCKWMEILRKNSNNNEY 65
            ::.:|..|..::.::.||||..|.|::.:...:..|:..|.:::.|:.:..|.:...|:..:..:
 Worm     2 VQLDRFEILFNNPEQAYFAGQEISGKVIIENKEPKKVNEILLELKGRARTYWTKHSGKSRKHCSH 66

  Fly    66 SRSLFYTS-KEVYEHSETPLPDFEPRGLELSAGEHTFIFEVALGRQLPSSFKGSYGAIKYKMRVL 129
            |...|... ...|.|..|.:.|.:.:...|.||.|...|...|.:.|||||:|.:|.|:|..:.:
 Worm    67 SEPYFLEQFNPGYTHKFTVVKDGKEKERILPAGIHQVPFSYTLPKSLPSSFEGEFGHIRYTCKAI 131

  Fly   130 IQRPWTFDERHTIPFTVV--KNMPLQPMQRSIPSSLEKQVTKTI------SLFGTRPITLLALLP 186
            .:|||.||......||||  :::...|......:.:|.....|.      |:.|...|:.....|
 Worm   132 CERPWDFDIVSRKAFTVVGIEDINSDPKLNEPATCVESNHAVTFCCRSAGSVTGEIRISKCGYTP 196

  Fly   187 EDFAVRGEPLRICATVIN-NSTTAVEKLRFTVLQYVTY-------YSHVPLRVQKVECIAVATKE 243
                  ||.:.:...||| :|.|....|||  :|..||       :.|:...|:.:..|......
 Worm   197 ------GEKIDVSFKVINLSSKTRTTALRF--VQQTTYKAKTFAGHEHIKNVVRVISKIDKGEVP 253

  Fly   244 TGSVQKKTERSFAHELLLPDGAQPTDEQMSGVITIVY--ELRVEAVLRGFFKNLILNLP----FK 302
            .||..:..|.|    :.:|  :.|.......::::.|  ||.||..|......:|.::|    ..
 Worm   254 GGSTTEWQEES----ITIP--SLPPKLGKCKILSVTYSVELEVEQTLTVPCPIVIGSIPQLSQLL 312

  Fly   303 VYSQ-------DPSNRQSSLRPPPPPRPND-----------GPPGPELGSGNLFEPAL------- 342
            ::|:       :.|..:||::..||...::           |....||  ||..|..|       
 Worm   313 IHSKQSVQSAGNGSLPKSSIKDSPPKWDSESCVQVTITDESGQLVEEL--GNEMEALLSARKRVR 375

  Fly   343 -------PVYPSLD-----------SSIGSPSHSSQFSECS 365
                   .:||::.           |.|......:||.|.|
 Worm   376 MPSSILSELYPTMPSPYYKESFFGASDISEEKEQAQFGEAS 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LeashNP_650037.2 Arrestin_N 6..152 CDD:451447 42/148 (28%)
Arrestin_C 191..308 CDD:214976 31/137 (23%)
arrd-17NP_499816.2 Arrestin_N 7..155 CDD:425619 42/147 (29%)
Arrestin_C 179..307 CDD:460676 33/141 (23%)

Return to query results.
Submit another query.