DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Leash and arrd-13

DIOPT Version :10

Sequence 1:NP_650037.2 Gene:Leash / 41320 FlyBaseID:FBgn0037856 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_496882.1 Gene:arrd-13 / 175022 WormBaseID:WBGene00011054 Length:460 Species:Caenorhabditis elegans


Alignment Length:516 Identity:114/516 - (22%)
Similarity:195/516 - (37%) Gaps:128/516 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MESERLRITLDSADRVYFAGDIIRGEIWMNVNK-RTKIRAIKVQVTGKGKCKW--MEILRK---N 59
            |....|.:..|..:.|:|.|..|.|.:.::..| :.|.||:.:::.|.....|  .|.:|:   :
 Worm     1 MPETELHVIFDQPNEVFFPGQPISGRVVLSTTKEKYKARAVNIKILGLAHTSWTDYESVRRVDAD 65

  Fly    60 SNNNEYSRSLFYTSKEVYEHSETPLPDFEPRGLELSAGEHTFIFEVALGRQLPSSFKGSYGAIKY 124
            ...:.:.:|:.|::...|......|...:....||:|||:.:.|...|...:|.||:|.||.::|
 Worm    66 GKVSHHRQSVHYSANVNYLDYTLLLWACKDGSNELAAGEYAWSFSYNLPLNVPPSFEGKYGYLRY 130

  Fly   125 KMRVLIQRPWTFDERHTIPFTVVKNMPLQPMQRSIPSSLEKQVTKTIS--LFGTRPITLLALLPE 187
            .:...:.|||..|:......||...:.|..:..:: :.:..|.::.:.  .|....:.|...:|:
 Worm   131 SVTAEVDRPWRLDKAKKRCITVSPLIDLNVIPHAL-TQINDQASENLGCCCFKKGYLELRVNIPK 194

  Fly   188 DFAVRGEPLRICATVINNSTTAVEKLRFTVLQYVTYYSHVPLRVQKVECIAVATK---------- 242
            ...|.||.:.:...::|:|:..|.:::..::|               :|..:|.:          
 Worm   195 TGFVPGETVPMNIHILNHSSVPVTEVKAKIIQ---------------QCKFIAYRNGTTFHYGGG 244

  Fly   243 -ETG----------------------SVQKKTERSFAHELLLPDGAQPTDEQMSGVITIVYELRV 284
             |||                      :|..:.|..||.||.|| ...||..|.|.|||:.|.::.
 Worm   245 YETGMSGQLQETKHDTKTVVKHGQEMTVAPRNEHKFAMELRLP-SVTPTINQFSPVITVEYIVQF 308

  Fly   285 EAVLRGFFKN--------LILNLPFK------VYSQDPSNRQSSLRPPP------PPRPNDG--- 326
            .......|.:        ||..:|.:      .|.|||:..|  :.|.|      .|.|..|   
 Worm   309 HVETSSTFGSDVDCEMGILIGTVPIRQFLPPAYYPQDPNLPQ--ILPTPIGGGVVAPPPGYGFLP 371

  Fly   327 -PPGPELGSGNLFEPA--LPVYPSLDSSIGSPSHSSQFSECSSINSITSDSSAATLSPAVGAGTG 388
             ..|.|.|:|:...||  :|:||.  .::..||               .|.....:..|      
 Worm   372 MADGSEKGAGDASYPAASMPMYPI--PNVPYPS---------------KDDGTVVIPSA------ 413

  Fly   389 GMDMSYTSGSQSSQYGSPSARTSLRSSNVPYMPYSSSPLMVQSYP-----PPHLPAYPPPE 444
             ..:||    :.|.:|......:...:..|:.|         .||     |.:.|..||||
 Worm   414 -PPLSY----EESMFGQDGTELNTDENEQPFAP---------KYPVFNNLPVYNPTAPPPE 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LeashNP_650037.2 Arrestin_N 6..152 CDD:451447 39/151 (26%)
Arrestin_C 191..308 CDD:214976 34/163 (21%)
arrd-13NP_496882.1 Arrestin_N 6..159 CDD:425619 39/152 (26%)
Arrestin_C 182..332 CDD:214976 33/165 (20%)

Return to query results.
Submit another query.