DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad86C and ft

DIOPT Version :10

Sequence 1:NP_001247033.1 Gene:Cad86C / 41302 FlyBaseID:FBgn0261053 Length:1949 Species:Drosophila melanogaster
Sequence 2:NP_477497.1 Gene:ft / 33627 FlyBaseID:FBgn0001075 Length:5147 Species:Drosophila melanogaster


Alignment Length:2265 Identity:451/2265 - (19%)
Similarity:777/2265 - (34%) Gaps:694/2265 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 PIGPWLGAMTAY-----------------------RLLTISLLIGILC----------PHHVQ-- 136
            |||..:..:||:                       ||..|...:|||.          |...:  
  Fly  1728 PIGTSILTVTAHLASAEIEYFVTNVTATGSRGQVDRLFDIDAKLGILSTAAELDREAGPEEYEVE 1792

  Fly   137 ------GADPKFDPTTRMRLVL------------------VPADAQVNSVIYRLRATDEEFDYPL 177
                  |..|: ...|::|:.:                  |..|.|:...|..|||.|.:....:
  Fly  1793 VYAIALGGQPR-TSRTKVRVTVLDKNDSPPQFLDTPFVYNVSEDLQIGHTISTLRAHDPDTLGSV 1856

  Fly   178 TFEFVGDASASTVKVESLPCTKYNSVCQANIVLQRRL--EPGRYYDFQVSVKD----TKGGMTTQ 236
            || .:.|.......:|  |.|       ..::|...|  |....|:.::.|.|    |:...|.|
  Fly  1857 TF-LLMDGHDGKFLLE--PST-------GKLILNDTLDRETKSKYELRIRVSDGVQYTEAYATIQ 1911

  Fly   237 LCSITATNFTTP--HDLIFPHKPGIIMIPEDAKRGTELDYVIARKNPLFQKPV----YLELWGSP 295
               ::.||...|  .|.::...     |||:|:||.::..::||...|.|...    .:..|.:.
  Fly  1912 ---VSDTNDNPPLFEDTVYSFD-----IPENAQRGYQVGQIVARDADLGQNAQLSYGVVSDWAND 1968

  Fly   296 LFAIRQKIVSSETTEGTVFLLGPLDFEKQAMYHLTILANDAYAEPGQDSRNIAGMEIVVIVQDVQ 360
            :|::..:       .|.:.|...||:|:...|.|.:.|.|    .||.|.:.. :.:...|.|:.
  Fly  1969 VFSLNPQ-------TGMLTLTARLDYEEVQHYILIVQAQD----NGQPSLSTT-ITVYCNVLDLN 2021

  Fly   361 DQPPVFTSAPPVTKLPPGILPGDKILQVHAEDGDKGNPREVRYGLVSENNPFTSFFDINETSGEI 425
            |..|:|......:::...:....:::.|.|:|.|.||...:.|.:.:  ....|.|.| :::|.|
  Fly  2022 DNAPIFDPMSYSSEVFENVPIATEVVTVSAKDIDSGNNGLIEYSITA--GDVDSEFGI-DSNGTI 2083

  Fly   426 FLMRPLEDIAFITHVGDPVLLTVIA-------------EEVK------------------VGRDE 459
            ...|.|:.....|:.     |||.|             ||.:                  :...:
  Fly  2084 RTRRNLDREHRSTYT-----LTVTARDCADEFASFSELEETQLKLKYRSPRKYQQTRQEFLAHQK 2143

  Fly   460 PPALASTVQLAFFLPDRTNSPPYFENDHYVSRVDENAPHGTALTFVDPYVPRVYDDDTGKNGVFS 524
            ...|:|||::...:.|..:..|.|.:.:..: :.||....|.:..|     :..|:|.|:||...
  Fly  2144 QQRLSSTVKVTILIKDVNDEVPVFISANETA-IMENVAINTVVIAV-----KAVDNDEGRNGYID 2202

  Fly   525 LTLLNNNG---------TFEISPNVAERSAGFLIRVRDNSMLDYEQQQSVQFQILAQELG--PAT 578
            ..:.....         .|.::|...:      :||.|  .||.|.:.|....|.|::.|  |.:
  Fly  2203 YLMKEARDEDMGQSDPLPFSLNPTDGQ------LRVVD--ALDRELRSSYLLNITARDRGEPPQS 2259

  Fly   579 NLSALVNVTVYINDVNDNAPVFEQPAYSVELPENMTAGTKVVQVLATDPDSGLGGKVRYTAILGY 643
            ..|.|:   :.|.|.|||:|||:...||..:.||.:.|..|:||.|||.|.|..|::||:.:||.
  Fly  2260 TESQLL---IRILDENDNSPVFDPKQYSASVAENASIGAMVLQVSATDVDEGANGRIRYSIVLGD 2321

  Fly   644 LNTSLNLDAETGLITVSTNKHGFDREVMPEYHLYVEARDMDGE---GNRAQVPLIIKLIDVNDET 705
            .|...::..:||::.|:.|   .:.|.:..|.|.|.|.|...|   |:.|:  |.|.::|:||..
  Fly  2322 QNHDFSISEDTGVVRVAKN---LNYERLSRYSLTVRAEDCALENPAGDTAE--LTINILDINDNR 2381

  Fly   706 PIF-DKDLYEFILTHDLM---GFTTTAVIHAEDKDATAPNNEVRYEIINGNYDNQFVLDKVTGEL 766
            |.| |......::.:.:.   |:..|  ::|.|.|....|::|||.:..|:.| .|.::..:|::
  Fly  2382 PTFLDSPYLARVMENTVPPNGGYVLT--VNAYDADTPPLNSQVRYFLKEGDSD-LFRINASSGDI 2443

  Fly   767 TVREKIHLRSKKNAKTRRRRQAGSDDEDTDIFILTARAYDLGVPVRFSTTTIR-----------V 820
            .:.:.:                  |.|....:.||..|.|.|.|....|..:|           |
  Fly  2444 ALLKPL------------------DREQQSEYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPV 2490

  Fly   821 YPPESRKRSVKFVVPG--H--NPDKAKTEETLSA-----LSGGKVYIHNIRPLSPDEPGAKDIPA 876
            :..:|...:|:..:|.  |  .|.....:|.|:|     |.|..::..:|     |....:...|
  Fly  2491 FELQSYHATVRENLPSGTHVLTPRATDKDEGLNAKLRFNLLGEHMHRFHI-----DSETGEISTA 2550

  Fly   877 GNPGIKERSVVTATVIYDSSSV-----------VDISEIQQRLSHHNNS---------------- 914
            .....:|.||...|::...||:           :.:|::...:...:::                
  Fly  2551 TTLDREETSVYHLTLMAQDSSITEPRASSVNLTISVSDVNDNIPKFDSTTYNVAVPERISKGEFV 2615

  Fly   915 -----------------YAIMPQD---------TSSTDTLTPLQTQYKAENKVLFWLLI------ 947
                             |.|..:|         |....|...|:|:.|:.:.:.:.::|      
  Fly  2616 FGARALDLDDGENAVVHYTISGRDQHYFDINTKTGVVSTKLELKTKTKSHDDLTYTIVISAMDQG 2680

  Fly   948 --LLATLVALTILIL---LLCCICSWCPLYGAAT------KRIVNISRTEDDVHLVHR---EMAN 998
              .|::...||:::.   |..........:.|.:      |.|..:|.|.....||.:   .:|.
  Fly  2681 EQSLSSKAELTVILRPPELFPTFAYMANSHFAMSEDVRPGKMITKVSATSPKKGLVGKIRYAIAG 2745

  Fly   999 GKQTKSVQVAEWMGRRDAWSAEKPPDTRTKPTRWEFHDGREQLDEDVGRGQDI----GEGDRRHI 1059
            |....|:                    |..|.......|::.||.::....:|    .:||...:
  Fly  2746 GIMGDSL--------------------RVDPNSGLLSVGQDGLDYELTHLYEIWIEAADGDTPSL 2790

  Fly  1060 QSAEEQQRRVRIKHNRTAKDDLHLNFHNSRTNL-INDRDVYMEDVIE--------------NRDL 1109
            :|...                :.||..::..|. :.::.:|..:|:|              :|| 
  Fly  2791 RSVTL----------------ITLNVTDANDNAPVMEQLIYNAEVLEEESPPQLIAVVKASDRD- 2838

  Fly  1110 AGDREHI---------------------TRTRVNRQEYARRKQYDSEVRHIDDD--------SMR 1145
            :||..::                     ||.|::|:|..   .|...|..:|..        |:.
  Fly  2839 SGDNGNVIYRLQNDFDGTFEITESGEIYTRMRLDREEIG---DYAFVVEAVDQGVPHMTGTASVL 2900

  Fly  1146 RHEIDRGSDIDFNTAHNSLKSKRELFIKDGNVEILQLMTRDKTRD---GLNLDDDNIYVNVP--- 1204
            .|.:|:..:....|...||....       |.||...:.|..:.|   |.|.:....:...|   
  Fly  2901 LHLLDKNDNPPKFTRLFSLNVTE-------NAEIGSFVIRVTSSDLDLGANANASYSFSENPGEK 2958

  Fly  1205 --LKP-------AGNLSHPQ-----LLMVDNTG---KEILMRRFIEEQPDGKQIIREHYQIVPGA 1252
              ::|       ||:|...|     |.:|.:.|   .|..:...|::|.|..... ||      :
  Fly  2959 FRIEPQSGNITVAGHLDREQQDEYILKVVASDGAWRAETPITITIQDQNDNAPEF-EH------S 3016

  Fly  1253 TYIQSMPNEVQQGSTLKGDTFPL--GKSGPNSIV-YSQLEPEVKVIHTQPVQAGEGVSLDQQMQP 1314
            .|..|.| |:||...|.|.....  .|.||||:: ||..:|       .|:     .|:|.....
  Fly  3017 FYSFSFP-ELQQSIALVGQIIATDRDKQGPNSVISYSLQQP-------SPM-----FSIDPATGE 3068

  Fly  1315 AVSNQSLTHELEHSLKQQNALLRQILMEKEKLENAYTQHEVALETQSLPGQSMAIGTQTDCDAGT 1379
            ..|.:::  ..:||...::.            ||.|....:|.:....|..|..:......||..
  Fly  3069 VFSKKAV--RFKHSQYVRSP------------ENMYALTVLATDNGKPPLYSECLVNINIVDAHN 3119

  Fly  1380 QTEGF-----------DGVLDPEISLAKPSRRRARSENDESMSEDGYEYVRFN------------ 1421
            ....|           |.|....|     .|..|..:.|...:|..|..:.||            
  Fly  3120 NPPKFEQAEYLAPLPQDAVRGQRI-----VRVHANDKQDLGTNEMDYSLMTFNLSSIFSVGRHDG 3179

  Fly  1422 ----------PPNSPEGVYWIKRRRTKK--RPRQPRKRIVMVEEVKRKIRTPIKEEEEVQERKKR 1474
                      |||:.   |.:..|.|.:  .|:....|:|:| .....:.||   ...|...:..
  Fly  3180 WITLVKPIQVPPNTR---YELVVRATDRGVPPQSDETRVVIV-VTGENMDTP---RFSVNSYQVI 3237

  Fly  1475 VPPKKPLRETKTSILRKQLSDESRKDQSRNG---ESQTGNRHRSESDSHNRDMFMEITDSMD--- 1533
            ||..:|:..|   ||....:|:   |...||   .|.:|...|.:.....|...:.|...:|   
  Fly  3238 VPENEPVGST---ILTVGATDD---DTGPNGMLRYSISGGNERQDFSVDERTGGIVIQQQLDYDL 3296

  Fly  1534 --------ELASPGSHSIRKIQV-----------EKYYKHSD-----------GDF-------DE 1561
                    .:...|.|.:..:.:           ...:.|.:           |.|       |:
  Fly  3297 IQEYHLNITVQDLGYHPLSSVAMLTIILTDVNDNPPVFNHKEYHCYIPENKPVGTFVFQAHAADK 3361

  Fly  1562 DDTEYSI------------------DSDGD---------------EIVIRTNYPSRAQE------ 1587
            |..:.:|                  .|:|.               .:.|:...|..:.|      
  Fly  3362 DSPKNAIIHYAFLPSGPDRHFFIMNQSNGTISSAVSFDYEERRIYTLQIKAKNPDSSMESYANLY 3426

  Fly  1588 ------NERYRRQERTYAEP--------ENPVDRKRPARKSSPTDSQPEA-MPRLSRRDSSKRGS 1637
                  ||.|.:    :.:|        .:.|..:..|.:::..||..:. :..|....|:.:|.
  Fly  3427 VHVLGVNEFYPQ----FLQPVFHFDVSETSAVGTRVGAVQATDKDSGEDGRVYYLLVGSSNDKGF 3487

  Fly  1638 RKQTSSEPPHNRVSISKYESTVTENGRKLMSTSTEIVGSKR-SLTDRSYQSETELAGLEHEERNV 1701
            |..|::    ..:.::::....|:| |.:::...:..||.| :.||     |.::.....:..:.
  Fly  3488 RIDTNT----GLIYVARHLDRETQN-RVVLTVMAKNYGSIRGNDTD-----EAQVIISIQDGNDP 3542

  Fly  1702 PKYMEWYYNKKKSSVSGRTSTESSKSQPSSK--------KKVGAAEKRVSKTRITAQPKDVEEYD 1758
            |::::.||          |||.|..:...:|        |.|.....:.|.:.|....|...:.|
  Fly  3543 PEFIKHYY----------TSTISEAAPVGTKVTTVKAIDKDVRTQNNQFSYSIINGNLKQSFKID 3597

  Fly  1759 ETGGRYKPEPAPRKSPPKGSRLLKEDR--------ALNKQHKPKIETDTNHPLLQH--------- 1806
            ...|...          ..|||.:|:.        |::....|:..:.|.|..|:.         
  Fly  3598 VQTGEIS----------TASRLDREETSTYNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPTFT 3652

  Fly  1807 --------SEHRFERENALEVPAAPTKLPHYMYPETPPHAAAGGK-------ESKSGRESKTSKE 1856
                    ||:.....:.:.:.|:...||....|.|  :...|||       :..||....|:..
  Fly  3653 PEGLNGYISENEPAGTSIMTLIASDPDLPRNGGPFT--YQLIGGKHKSWLSVDRNSGVVRSTTSF 3715

  Fly  1857 AKPKPSPIRENEVKVSNSKIYVEHRGTGHPTQK--QLNASTLEDDHDSGIAMNSL 1909
            .: :.:||.|..::|.:|         |.|.||  .|...|:.|.:|:.....||
  Fly  3716 DR-EMTPILEAIIEVEDS---------GKPKQKSQHLLTITVLDQNDNPSTTRSL 3760

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad86CNP_001247033.1 Cadherin_repeat 260..361 CDD:206637 26/104 (25%)
Cadherin_repeat 372..469 CDD:206637 25/127 (20%)
Cadherin_repeat 487..596 CDD:206637 27/119 (23%)
Cadherin_repeat 605..703 CDD:206637 35/100 (35%)
Cadherin_repeat 728..820 CDD:206637 21/102 (21%)
PTZ00449 <1428..1918 CDD:185628 113/624 (18%)
ftNP_477497.1 Cadherin_repeat 71..152 CDD:206637
Cadherin_repeat 163..266 CDD:206637
Cadherin_repeat 275..378 CDD:206637
Cadherin_repeat 393..490 CDD:206637
Cadherin_repeat 498..594 CDD:206637
Cadherin_repeat 603..704 CDD:206637
Cadherin_repeat 735..814 CDD:206637
Cadherin 843..>907 CDD:394985
Cadherin 950..1026 CDD:394985
Cadherin_repeat 1053..1149 CDD:206637
Cadherin_repeat 1157..1274 CDD:206637
Cadherin_repeat 1282..1380 CDD:206637
Cadherin_repeat 1390..1485 CDD:206637
Cadherin_repeat 1497..1597 CDD:206637
Cadherin_repeat 1621..1699 CDD:206637
Cadherin_repeat 1720..1818 CDD:206637 16/90 (18%)
Cadherin_repeat 1827..1918 CDD:206637 25/103 (24%)
Cadherin_repeat 1926..2023 CDD:206637 26/113 (23%)
Cadherin_repeat 2031..2162 CDD:206637 26/138 (19%)
Cadherin_repeat 2172..2274 CDD:206637 27/118 (23%)
Cadherin_repeat 2282..2380 CDD:206637 36/102 (35%)
Cadherin_repeat 2388..2487 CDD:206637 23/119 (19%)
Cadherin_repeat 2495..2592 CDD:206637 20/101 (20%)
Cadherin_repeat 2600..2694 CDD:206637 12/93 (13%)
Cadherin_repeat 2710..2806 CDD:206637 21/131 (16%)
Cadherin_repeat 2814..2909 CDD:206637 18/98 (18%)
Cadherin_repeat 2917..3009 CDD:206637 21/98 (21%)
Cadherin 3018..3114 CDD:394985 28/122 (23%)
Cadherin 3129..3220 CDD:394985 20/99 (20%)
Cadherin_repeat 3233..3330 CDD:206637 18/102 (18%)
Cadherin_repeat 3338..3434 CDD:206637 10/95 (11%)
Cadherin_repeat 3443..3541 CDD:206637 18/107 (17%)
Cadherin_repeat 3550..3647 CDD:206637 22/116 (19%)
Cadherin_repeat 3657..3753 CDD:206637 25/107 (23%)
EGF 4017..4047 CDD:394967
EGF_CA 4056..4090 CDD:238011
EGF_CA 4094..4128 CDD:238011
Laminin_G_1 4156..4306 CDD:395008
LamG 4428..4543 CDD:238058
Blue background indicates that the domain is not in the aligned region.

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