Protein Alignment TfIIFbeta and AT3G52270

DIOPT Version :10

• Sequence 1: NP_524305.2
• Gene: TfIIFbeta / 41290
• FlyBaseID: FBgn0010421
• Length: 277
• Species: Drosophila melanogaster
• Sequence 2: NP_190795.3
• Gene: AT3G52270 / 824392
• AraportID: AT3G52270
• Length: 269
• Species: Arabidopsis thaliana
• Alignment Length: 296
• Identity: 70/296 - (23%)
• Similarity: 126/296 - (42%)
• Gaps: 71/296 - (23%)

  Fly     1 MSKEDKEKTQI---IDKD----LDLSNAGRGVWLVKVPKYIAQKWEKAPTNMDVGKLRINKTPGQ 58
            ||..:.|..::   :.|:    |:...|.|.:.|:|.|..:|            ..|:.:..|..
plant     1 MSLREMEDVKVEMKVRKNENEALETGLAERSMLLMKAPSLVA------------SSLQSHSFPDD 53

  Fly    59 KAQVSLSLTP---AVLALDP--EEKIPTEHILDVSQV------TKQTLGVFSHMAP-------SD 105
            ..:......|   .:|.:||  .|...|:.::::::.      .:.||.:.....|       ||
plant    54 PYRPDDPYRPDAKVILGVDPLAHEDEGTQFVMELARADSGNMPRRYTLDMSKDFIPMNVFCESSD 118

  Fly   106 GKENSTTSAAQPDNEKLYMEGRIVQKLECRPIADN--CYMKLKLESIRKASEPQRRVQPIDK--- 165
            |              |:.:||:|..|.:.||..:|  .|.:|..|...|.....|::|.||.
plant   119 G--------------KMSVEGKIKNKFDMRPHNENIESYGRLCRERTNKYMGKNRQIQVIDNARG 169

  Fly   166 ---------IVQNFKPVKDHAHNIEYRERKKAEGKKARDDKNAVMDMLFHAFEKHQYYNIKDLVK 221
                     |:....|.|....|      :.:|.|:.|.|:..:.:::|:.||:...:.::.|::
plant   170 MHMRPMPGMIIPTAAPEKKKLTN------RTSEMKRTRRDRREMEEVMFNLFERQSNWTLRLLIQ 228

  Fly   222 ITNQPISYLKEILKDVCDYNMKNPHKNMWELKKEYR 257
            .|:||..:||::|||:|.||.|..::..:|||.||:
plant   229 ETDQPEQFLKDLLKDLCIYNNKGSNQGTYELKPEYK 264

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TfIIFbeta	NP_524305.2	TFIIF_beta	13..136	CDD:259828	27/144 (19%)
		TFIIF_beta	193..257	CDD:426691	22/63 (35%)
AT3G52270	NP_190795.3	TFIIF_beta	23..135	CDD:445677	26/137 (19%)
		TFIIF_beta	<91..269	CDD:445677	51/194 (26%)