Protein Alignment TfIIFbeta and TfIIFbeta

DIOPT Version :10

• Sequence 1: NP_524305.2
• Gene: TfIIFbeta / 41290
• FlyBaseID: FBgn0010421
• Length: 277
• Species: Drosophila melanogaster
• Sequence 2: XP_308768.3
• Gene: TfIIFbeta / 1270098
• VectorBaseID: AGAMI1_009173
• Length: 272
• Species: Anopheles gambiae
• Alignment Length: 278
• Identity: 198/278 - (71%)
• Similarity: 232/278 - (83%)
• Gaps: 9/278 - (3%)

  Fly     1 MSKEDKEKTQIIDKDLDLSNAGRGVWLVKVPKYIAQKWEKAPTNMDVGKLRINKTPGQKAQVSLS 65
            ||||  .:...:||:||||||||||||||||||||.||||||.|::||||:|:|..||||||||:
Mosquito     1 MSKE--AEAIRVDKELDLSNAGRGVWLVKVPKYIANKWEKAPGNIEVGKLKISKQVGQKAQVSLT 63

  Fly    66 LTPAVLALDPEEKIPTEHILDVSQVTKQTLGVFSHMAPSDGKENSTTSAAQPDNEKLYMEGRIVQ 130
            |:.||:.:||.|:||.:|.||||.|||||||||||..      .:|.....|:.||.||||||||
Mosquito    64 LSDAVINIDPAEEIPRDHRLDVSVVTKQTLGVFSHAV------TTTRDDPVPECEKQYMEGRIVQ 122

  Fly   131 KLECRPIADNCYMKLKLESIRKASEPQRRVQPIDKIVQNFKPVKDHAHNIEYRERKKAEGKKARD 195
            ||||||.||:||||:|||||||||:|.|:|:.::|||.|:|||.||.||||.||||||||||:||
Mosquito   123 KLECRPYADHCYMKMKLESIRKASQPARQVKSLEKIVHNYKPVSDHKHNIEDRERKKAEGKKSRD 187

  Fly   196 DKNAVMDMLFHAFEKHQYYNIKDLVKITNQPISYLKEILKDVCDYNMKNPHKNMWELKKEYRHYK 260
            |||||:||||:||||||||||||||:||.|||||||||||:||||||||||||||||||||||||
Mosquito   188 DKNAVLDMLFNAFEKHQYYNIKDLVRITRQPISYLKEILKEVCDYNMKNPHKNMWELKKEYRHYK 252

  Fly   261 TEEKKEEE-HKSGSSDSE 277
            .::||::: .|...|||:
Mosquito   253 EDDKKDDDTTKDTMSDSD 270

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TfIIFbeta	NP_524305.2	TFIIF_beta	13..136	CDD:259828	83/122 (68%)
		TFIIF_beta	193..257	CDD:426691	57/63 (90%)
TfIIFbeta	XP_308768.3	TFIIF_beta	11..128	CDD:259828	75/116 (65%)
		TFIIF_beta	185..249	CDD:426691	57/63 (90%)