DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cap-H2 and HEB2

DIOPT Version :10

Sequence 1:NP_650014.2 Gene:Cap-H2 / 41289 FlyBaseID:FBgn0037831 Length:960 Species:Drosophila melanogaster
Sequence 2:NP_188295.2 Gene:HEB2 / 820925 AraportID:AT3G16730 Length:683 Species:Arabidopsis thaliana


Alignment Length:419 Identity:83/419 - (19%)
Similarity:162/419 - (38%) Gaps:62/419 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   562 PQNEREPGSPCSLEFD--EDLNFLGFRQRRPTFDSGFDIEEPRVSSCVSTIGEVKTELEDEIEAN 624
            |.|..|||......|.  :.|..:|:...:....|.|.:..|.        |.:.:||.:..:.:
plant   306 PLNPYEPGKLKVKPFKKVKILKKIGWSITKDHMTSMFPLARPN--------GPISSELIEIWKMH 362

  Fly   625 TNNLTDASAS------DALNENVNDTKESGLGDSLAQELNASTEPNAENNTANSSQLEVTATESS 683
            .....|..||      :.|.|.:               :|...:|...|...|.:..:.....::
plant   363 GCASKDEQASQDIPYYEKLREML---------------VNGGNQPCGANGNYNDNDKDNHDEANN 412

  Fly   684 GTLSGLETTVDLGMESALVSSVLDLSTEPSAMDSNIINVTQPDNSD------LEISTVQDQDTLH 742
            |...      |.|....      |.:..| .||.:::|:.....::      .|......|::|.
plant   413 GDFH------DFGEHDG------DDAEHP-FMDEDVLNMNDGGAAEFHNYDGFENGESNCQESLE 464

  Fly   743 DEADANDLSAETPNPIADS--AVDDCSLIRDWHRRLAPALEAAHERQNFNIKDLGTEI---LDIC 802
            |...:: |.|...| ||.|  ..|..:.:..|.:::...||.......|:|::.|..|   |.:.
plant   465 DLCRSH-LDALLAN-IAKSEKQTDLAARVSTWKQKIEQNLEEQELHPPFDIQEYGDRIINKLTVE 527

  Fly   803 KAGNRTATLADVMADKDPSIMCRYMLASLVLTNHGNVSLDFENRDKSKPIDMSQFRMHLKSMKRM 867
            ::|| ..|..|:|.|::...:.|...|.|.|.|:|:|.|:......::|:..:..:..  |::.:
plant   528 ESGN-VETFTDLMKDQEKHEVARAFSALLQLVNNGDVDLEKPGNSTNEPMCYTAVKPF--SVRLL 589

  Fly   868 EI-NPEDDVGNINAAQSKS-TPRSKQLNDSAHKPRTSTTASAPTKRKSAENSLSEVFAKTVRLIQ 930
            :: |.:::...|:..|.:: :|.:|..:..:..|:...|.|..::.:.....:|::....||...
plant   590 KVHNRKNEKRGIHLPQKRAKSPITKGKSHESPPPKKRNTCSVSSQTRKVSLKISKINGVGVRCTP 654

  Fly   931 PIPKMWPTPSDADSGISSMGSSLASTARL 959
            ...|.....||..:.::.:.|...|..:|
plant   655 NSKKRRKGRSDDVTEVTEVASIEKSLGKL 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cap-H2NP_650014.2 CNDH2_C <769..862 CDD:465283 23/95 (24%)
HEB2NP_188295.2 CNDH2_N 15..131 CDD:461866
CNDH2_M 153..281 CDD:435617
CNDH2_C 303..590 CDD:465283 66/324 (20%)
Blue background indicates that the domain is not in the aligned region.

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