DRSC/TRiP Functional Genomics Resources

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Protein Alignment pug and mthfd1a

DIOPT Version :10

Sequence 1:NP_731489.2 Gene:pug / 41279 FlyBaseID:FBgn0020385 Length:968 Species:Drosophila melanogaster
Sequence 2:XP_695978.4 Gene:mthfd1a / 567587 ZFINID:ZDB-GENE-041001-127 Length:919 Species:Danio rerio


Alignment Length:925 Identity:450/925 - (48%)
Similarity:611/925 - (66%) Gaps:32/925 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 AKIISGTAVAKSIREELRNEVTAMSKQLADFVPGLRIVQVGGREDSNVYIRMKIKAATEIGIDAA 102
            |.::||...::.:::.|:.||..|..|...|.|||.::|||.|||||:||.||:|||.||||:|.
Zfish    25 ATVVSGNKTSQQVKQRLKEEVEQMKSQFPGFRPGLVVLQVGDREDSNLYISMKLKAAAEIGINAN 89

  Fly   103 HVQLPRSITEVELLDKINDLNEDPRVHGIIVQMPLDCDTPIDSHRITDAVSPEKDVDGLHTVNEG 167
            |::||.:.||.|:|..|..:||:|..||:|||:|||...||::.:||:||:||||||||.::|.|
Zfish    90 HIRLPETATENEVLRNIVAVNENPAFHGLIVQLPLDSINPINTEKITNAVAPEKDVDGLTSINAG 154

  Fly   168 RLAIGDLGG-FLPCTPWGCLELIRRSGVEIAGARAVVLGRSKIVGTPAAELLKWANATVTVCHSK 231
            :|:.||||. |:||||.||:|||.::||.:.|..|||:|||||||.|..:||.|::||||.||||
Zfish   155 KLSRGDLGDCFIPCTPNGCMELISQTGVSVMGKNAVVIGRSKIVGAPMHDLLLWSHATVTTCHSK 219

  Fly   232 TRNLEEITRSADILVVGIGVAEMVKGSWIKPGAVVIDCGINVKPDASKASGSKLVGDVDYAEALQ 296
            |.:|.|....|||||||.|.||||||.|:|.||||||||||..||.|||||.::||||.|..|.|
Zfish   220 TPDLAEQVGKADILVVGAGRAEMVKGEWVKEGAVVIDCGINHIPDESKASGKRVVGDVHYPSAKQ 284

  Fly   297 VAGHLTPVPGGVGPMTVAMLMKNTVRSAARFLERLAKSQWALQTLPLKPQRPVPSDIVIARAQKP 361
            .||.:||||||||||||||||||||.||.|||:.....:|.|.....:|..|.|||..|:.:.:.
Zfish   285 RAGFITPVPGGVGPMTVAMLMKNTVESAKRFLQTHTPGKWNLVYTKKRPHEPQPSDAAISSSCES 349

  Fly   362 KDIAVLAKEIGLEAREVSLYGNKKAKISLSVLERLKDKEVGHYVVVAGMTPTPLGEGKTTTLMGL 426
            |.:..||:|:||.:.||..||..:|||.|..|:|::.:..|.||||.|:|.:||||||.||.:||
Zfish   350 KPVVQLARELGLFSDEVESYGRSRAKIRLDALKRMEKQPNGKYVVVTGVTSSPLGEGKRTTALGL 414

  Fly   427 VQALGAHKLRNTMAALRQPSQGPTFGIKGGAAGGGYAQVIPMEEFNLHLTGDIHAVSAANNLLAA 491
            .||||||...|..|.:::.|....||.:|.|.||||:|:||:||.:|..:|....||||..|:..
Zfish   415 AQALGAHLNTNAFACVQKSSLETCFGARGPAVGGGYSQIIPLEEVSLQPSGQNELVSAAGRLVMD 479

  Fly   492 QLDTRIFHENTQKDKALYDRLVPAIKGQRKFSPIQLRRLQKLGITKTDPDTLTADEYGPFARLDI 556
            .:.....:|....:|||:|.|||..:|||..|..||.||:||.|.|:||.|||..|...|.||||
Zfish   480 TVKAYAHYETKLSEKALFDLLVPLREGQRCVSLAQLNRLKKLAIEKSDPLTLTEREIRRFIRLDI 544

  Fly   557 DPDTIMWERVVDINDRYLRTITVGQSPTEKGISRETRFSISVASEIMAVLALSRSLEDMKQRLAD 621
            |.|                      |.|:         |.|:.:|:||||:||.|.|:|:.|||:
Zfish   545 DTD----------------------SATD---------SFSLENEMMAVLSLSSSEEEMQHRLAN 578

  Fly   622 MVVAFDKRGKPVTADDLGVTGALAVLLKDALEPNLMQSLEGTPVLVHAGPFANIAHGCNSIIADE 686
            ::||.:|.|.|:|.:||.|:|.||:|||:||:|.|||::|||||.:|..|..|:|.|..||:||:
Zfish   579 IIVATNKSGDPITTEDLNVSGPLAMLLKEALKPVLMQTVEGTPVFLHTSPLVNVAQGGPSILADK 643

  Fly   687 VGLKLVGKNGFVCTEAGFGSDIGMEKFCNIKCRTSGRKPNAMVLVATVRAIKMHGGGAPVTPGAP 751
            :.||:||..|||.||:|.|:|:|:|||.||||..||.:|:.:|:|||:|.:||.||..|:..|.|
Zfish   644 MALKIVGSEGFVVTESGHGADVGLEKFFNIKCLYSGLQPDVLVMVATIRTLKMQGGAPPIQAGLP 708

  Fly   752 LNKQYTEENLELVQKGLPNLLQHIENGKAFGMPVVVSLNAHSADTPAEHELVKKAALEAGAFAAV 816
            |.|:|.:|||:.:::|..::.:.:|..:|||:||:|::|..|:||.||.|||...|.:||||.||
Zfish   709 LPKEYLQENLKQLERGCCHMRRQVEKAQAFGLPVIVAVNKFSSDTDAELELVCGQARQAGAFDAV 773

  Fly   817 VSTHWADGGAGAVQLADAVIKACEQGNQFRLLYDLELPLVDKMNKIATTMYGAGKVVLSPAAEEK 881
            ..:.|::|||||:.||:.|.:|.:....|:.||||:.|..||:..:|..|||...|.|||.|:||
Zfish   774 QCSSWSEGGAGALALAETVQRAAKLPACFKFLYDLQTPASDKLRTVAQKMYGLKDVKLSPKAKEK 838

  Fly   882 VKRLTDAGFGNLPICMSKVSGSFTGDAKIKGAPKGFTLDVEDVYVSAGAGFVVAMCGEVTKMPGL 946
            :...|..||.|||:|::|...|.:.|..:||:...|.|.:.|:..:|||||:..:.|........
Zfish   839 LALYTKQGFENLPVCIAKTPLSLSNDPMMKGSSTDFMLPITDIKANAGAGFLCCLTGSTNAEMDD 903

  Fly   947 PTRPAIYDIDLNTET 961
            |..|..:..:|.:::
Zfish   904 PMWPCFHGNNLYSDS 918

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pugNP_731489.2 FolD 35..326 CDD:439960 174/288 (60%)
FTHFS 350..968 CDD:460143 269/612 (44%)
mthfd1aXP_695978.4 FolD 25..314 CDD:439960 174/288 (60%)
P-loop containing Nucleoside Triphosphate Hydrolases 327..910 CDD:476819 270/613 (44%)

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