DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hth and irx5a

DIOPT Version :10

Sequence 1:NP_476576.1 Gene:hth / 41273 FlyBaseID:FBgn0001235 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_001038692.1 Gene:irx5a / 573346 ZFINID:ZDB-GENE-010716-2 Length:446 Species:Danio rerio


Alignment Length:214 Identity:57/214 - (26%)
Similarity:88/214 - (41%) Gaps:59/214 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   228 ADSTSHTDGASTPDVRPPSSSLSYGGAMNDDARSPGAGSTPGPLSQQPPALDTSDPDGKFLSSLN 292
            |.|||...|..|.::         |.:.:..|.:|.||||.                   .:|.:
Zfish    22 AYSTSVISGPRTEEL---------GRSSSGSAFAPYAGSTA-------------------FTSAS 58

  Fly   293 P---SELTYDGRWCRREWSSPADARNADASRRLYSSVFLGSPDNFGTSASGDASNASIGSGEGTG 354
            |   |.|.|                :|||:.....:.::.||.:..|..:|........:..|:.
Zfish    59 PGYNSHLPY----------------SADAAAAATFTSYVSSPYDHTTGMAGSIGYHPYAAPLGSY 107

  Fly   355 EEDDDASGKKNQKKRGIFPKVATNILRAWLFQHLTHPYPSEDQKKQLAQDTGLTILQVNNWFINA 419
            ...|.|. :||..:.      ||..|:|||.:|..:|||::.:|..||..|.:|:.||:.||.||
Zfish   108 PYGDPAY-RKNATRD------ATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANA 165

  Fly   420 RRRIVQPMIDQSNRAVYTP 438
            |||     :.:.|:..:||
Zfish   166 RRR-----LKKENKMTWTP 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hthNP_476576.1 Meis_PKNOX_N 127..211 CDD:465140
Homeobox_KN 384..422 CDD:428673 17/37 (46%)
irx5aNP_001038692.1 Homeobox_KN 130..168 CDD:428673 17/37 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 175..312 2/5 (40%)
IRO 307..324 CDD:214716
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.