DRSC/TRiP Functional Genomics Resources

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Protein Alignment hth and tgif2

DIOPT Version :10

Sequence 1:NP_476576.1 Gene:hth / 41273 FlyBaseID:FBgn0001235 Length:487 Species:Drosophila melanogaster
Sequence 2:XP_002932897.1 Gene:tgif2 / 100127190 XenbaseID:XB-GENE-876497 Length:266 Species:Xenopus tropicalis


Alignment Length:85 Identity:41/85 - (48%)
Similarity:56/85 - (65%) Gaps:1/85 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   349 SGEGTGEEDDDASGKKNQKKRGIFPKVATNILRAWLFQHLTHPYPSEDQKKQLAQDTGLTILQVN 413
            |||..|..:.|.||.| :|:||..||.|..|||.|||:|..:.||||.:|..|:..|.||:||:.
 Frog    23 SGEDEGSSELDISGAK-RKRRGNLPKDAVKILRDWLFEHRFNAYPSEQEKLSLSGQTNLTVLQIC 86

  Fly   414 NWFINARRRIVQPMIDQSNR 433
            |||||||||::..::.:..:
 Frog    87 NWFINARRRVLPELLRKDGK 106

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hthNP_476576.1 Meis_PKNOX_N 127..211 CDD:465140
Homeobox_KN 384..422 CDD:428673 21/37 (57%)
tgif2XP_002932897.1 Homeobox_KN 57..95 CDD:428673 21/37 (57%)
Blue background indicates that the domain is not in the aligned region.

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