DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6345 and AT1G72090

DIOPT Version :9

Sequence 1:NP_650002.1 Gene:CG6345 / 41271 FlyBaseID:FBgn0037816 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_565035.1 Gene:AT1G72090 / 843540 AraportID:AT1G72090 Length:601 Species:Arabidopsis thaliana


Alignment Length:526 Identity:128/526 - (24%)
Similarity:225/526 - (42%) Gaps:94/526 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 PGFQ---DFFAVKPASRLKTDEEEHVDTSVPYLN----------SIDFNGNGRKVHFEVYGCQMN 104
            |||:   :...:.|    ||::.:.:.:....:.          |:...|. :.::.:.:||..|
plant    17 PGFRLPLNAVGINP----KTNKSKRISSKPDQITASNRDSLAPPSMKIPGT-QTIYIKTFGCSHN 76

  Fly   105 TNDTEVVFSILKENGYLRCQEPEEADVIMLVTCAVRDGAEQRIRNRLKHLRAMKNKRSTRRHPLQ 169
            .:|:|.:...|...||...:.|||||:.::.||.|:..::..:...:...|:.|.         .
plant    77 QSDSEYMAGQLSAFGYALTEVPEEADLWLINTCTVKSPSQSAMSTLITRGRSGKK---------P 132

  Fly   170 LTLLGCMAERLKEKLLEQEQCVDVIAGPDSYKDLPRLLAI-SRHYGNSAINVLLSLDETYADVMP 233
            |.:.||:.:..::  |::.:.|.|:    ..:.:.|::.| ........:.:|........|:..
plant   133 LVIAGCVPQGSRD--LKELEGVSVV----GVQQIDRVVEIVEETLKGHEVRLLTRKTLPALDLPK 191

  Fly   234 VRLNSESPTAFVSIMR---GCDNMCTYCIVPFTRGRERSRPLASIVAEVKALAEQGVKEVTLLGQ 295
            ||.|:     |:.|:.   ||...||||.....||...|..:.|:|..|:.:..:||||:.|..:
plant   192 VRRNN-----FIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVERVRTVISEGVKEIWLSSE 251

  Fly   296 NVNSY-RDRTAQEEQDSLKATPVPGFSTVYKPKTGGTPFAALLRSVAQAVPD-----MRIRFTSP 354
            :..:| ||.                          |.....||.::.:.:|.     :||..|:|
plant   252 DTGAYGRDI--------------------------GVNLPILLNAIVKELPSDQSTMLRIGMTNP 290

  Fly   355 -----HPKDFSDEVLEVIRDHPNVCKQLHLPAQSGNTQVLERMRRGYSREAYLELVQHIRQFLPN 414
                 |.|    |:..|:| ||.|...||:|.|||:..||..|.|.|:...:..:|..:.:.:|.
plant   291 PFILEHLK----EIAAVLR-HPCVYTFLHVPVQSGSDSVLTAMNREYTASEFRTVVDTLTELVPG 350

  Fly   415 VGLSSDFICGFCGETEEEFQDTVSLIQQVQYNVAYLFAYSMREKTTAHRRYKDDVPINVKNERLQ 479
            :.:::|.||||.|||:|:|..||.||:..::...::..:..|..|.|.:..|  |...:..:|.:
plant   351 MQIATDIICGFPGETDEDFSQTVELIKDYKFPQVHISQFYPRPGTPAAKMKK--VQSKIVKQRSR 413

  Fly   480 RMVQVFREGATQLHRKMEGQEQLILIEGKSKRSDAHWFGRNDANIKVIVPSIYVPIS--GDSTAR 542
            .:..||...|.  :..||.:|:.|.|. :......|..|.....::|:|..   |.|  |.|...
plant   414 ELTSVFEAFAP--YTGMECREERIWIT-EVATDGIHLVGHTKGYVQVLVTG---PESMLGTSAMA 472

  Fly   543 KSFGVG 548
            :...||
plant   473 RITSVG 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6345NP_650002.1 PRK14329 88..570 CDD:237676 121/478 (25%)
UPF0004 93..196 CDD:279287 24/102 (24%)
TRAM 494..568 CDD:280171 15/57 (26%)
AT1G72090NP_565035.1 UPF0004 65..156 CDD:279287 24/105 (23%)
MiaB-like-B 66..487 CDD:273703 120/472 (25%)
Radical_SAM 201..406 CDD:100105 68/237 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0621
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D835984at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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