DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6345 and AT4G36390

DIOPT Version :10

Sequence 1:NP_650002.1 Gene:CG6345 / 41271 FlyBaseID:FBgn0037816 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_195357.2 Gene:AT4G36390 / 829791 AraportID:AT4G36390 Length:640 Species:Arabidopsis thaliana


Alignment Length:594 Identity:276/594 - (46%)
Similarity:377/594 - (63%) Gaps:39/594 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 HASTTAS-------KGATTSVTSSAAGQLK--SEPAARATFLERIQR-----GPGFQDFFAVKPA 64
            |||:::|       :.:|..:|.....:.|  |...:|:..:.:|..     ||....|.:...|
plant    42 HASSSSSSALLPRCRSSTHRLTQKPINRKKGFSLNLSRSFSISQIASSGKFDGPSLHQFVSNAQA 106

  Fly    65 -SRLKTDEEEHVDTSVPYLNSIDFNGNGRKVHFEVYGCQMNTNDTEVVFSILKENGYLR-CQEPE 127
             :.|.|.|.|...|    |:| |....|| ::.|.||||||.||.|:|.:|:|.:||.. ..:||
plant   107 HASLTTPETESEST----LDS-DIASKGR-IYHETYGCQMNINDMEIVLAIMKNSGYKEVVTDPE 165

  Fly   128 EADVIMLVTCAVRDGAEQRIRNRLKHLRAMKNK--------RSTRRHPLQLTLLGCMAERLKEKL 184
            .|:||.:.|||:|:.||||:..||.:...:|.:        |:....|.::.:|||||||||:|:
plant   166 SAEVIFVNTCAIRENAEQRVWQRLNYFWFLKREWKVNAATGRAKSLKPPKVVVLGCMAERLKDKI 230

  Fly   185 LEQEQCVDVIAGPDSYKDLPRLLAISRHYGNSAINVLLSLDETYADVMPVRLNSESPTAFVSIMR 249
            |:.::.|||:.|||:|:||||||. ...||...||.||||:|||||:.|||::..|.|||||:||
plant   231 LDSDKMVDVVCGPDAYRDLPRLLE-EVDYGQKGINTLLSLEETYADISPVRISENSITAFVSVMR 294

  Fly   250 GCDNMCTYCIVPFTRGRERSRPLASIVAEVKALAEQGVKEVTLLGQNVNSYRDRTAQEEQDSLKA 314
            ||:|||.:||||||||||||||:.||:.||..|.|.|||||||||||||||.|.:|..|..: ..
plant   295 GCNNMCAFCIVPFTRGRERSRPVESIIREVGELWESGVKEVTLLGQNVNSYNDDSADRESGA-NW 358

  Fly   315 TPVPGFSTVYKPKTGGTPFAALLRSVAQAVPDMRIRFTSPHPKDFSDEVLEVIRDHPNVCKQLHL 379
            ....|||:..|.|..|..||.||..::...|:||.|||||||||:.||:|.::||..|:|..:||
plant   359 EYSEGFSSRCKVKNMGLRFADLLDRLSVEFPEMRFRFTSPHPKDYPDELLYLMRDRHNICNLIHL 423

  Fly   380 PAQSGNTQVLERMRRGYSREAYLELVQHIRQFLPNVGLSSDFICGFCGETEEEFQDTVSLIQQVQ 444
            ||||||:::||:|||||:|||||:||:.||..:|:|.::||||.|||||||||.|:|:||::.|.
plant   424 PAQSGNSRILEQMRRGYTREAYLDLVKKIRSIIPDVAITSDFITGFCGETEEEHQETLSLVRAVG 488

  Fly   445 YNVAYLFAYSMREKTTAHRRYKDDVPINVKNERLQRMVQVFREGATQLHRKMEGQEQLILIEGKS 509
            |::||:|||||||||.|||.|.||||..||..||..::..|||.....:....|..||:|:||.:
plant   489 YDMAYMFAYSMREKTHAHRNYTDDVPEEVKQRRLTELIDAFRETTGPCYDSQVGSTQLVLVEGPN 553

  Fly   510 KRS-DAHWFGRNDANIKV--IVPSIY---VPISGDSTARKSFGVGDFLAVRIEESNSQVLKGTPL 568
            ||: :....|:.|...:|  :...::   ..:.||...|.. |:|||:.|:||:|....|.|..|
plant   554 KRAPETELIGKTDKGHRVSFVTKPLFDKACLLDGDDLKRNP-GIGDFVEVQIEKSTRASLFGEAL 617

  Fly   569 ELSNITDFH 577
            .:|.::.||
plant   618 AISKMSLFH 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6345NP_650002.1 MiaB 91..569 CDD:440386 250/492 (51%)
AT4G36390NP_195357.2 MiaB 128..618 CDD:440386 250/493 (51%)

Return to query results.
Submit another query.