DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6345 and F25B5.5

DIOPT Version :10

Sequence 1:NP_650002.1 Gene:CG6345 / 41271 FlyBaseID:FBgn0037816 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_498290.1 Gene:F25B5.5 / 175841 WormBaseID:WBGene00017776 Length:547 Species:Caenorhabditis elegans


Alignment Length:541 Identity:265/541 - (48%)
Similarity:359/541 - (66%) Gaps:48/541 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 AVKPASRLKTD------------EEEHVDTSVP-------YLNSIDFNGNGRKVHFEVYGCQMNT 105
            ||||...:.||            :::.....:|       |||..|..||||.|.:..||||||.
 Worm    28 AVKPKRAIPTDGLQLSDFIKESTKKQRQKAIIPSIEDTKEYLNPEDLQGNGRTVCYVTYGCQMNV 92

  Fly   106 NDTEVVFSILKENGYLRCQEPEEADVIMLVTCAVRDGAEQRIRNRLKHLRAMKNKRSTRRHPLQL 170
            :|.|:|.||:.:.|::...:.|.||:::|:||::|||||:::.|:||.:|:    .|..:..: :
 Worm    93 SDMEIVRSIMTKYGFVESDKKENADIVLLMTCSIRDGAEKKVWNQLKLIRS----NSVNKGQI-V 152

  Fly   171 TLLGCMAERLKEKLLEQEQCVDVIAGPDSYKDLPRLLAISRHYGNSAINVLLSLDETYADVMPVR 235
            .:|||||||::..|||:...|:::||||||:|||||:|::.. |::.|||.||||||||||.|:|
 Worm   153 GVLGCMAERVRHDLLEKRNLVNIVAGPDSYRDLPRLVAVAAG-GSNGINVQLSLDETYADVQPIR 216

  Fly   236 LNSESPTAFVSIMRGCDNMCTYCIVPFTRGRERSRPLASIVAEVKALAEQGVKEVTLLGQNVNSY 300
            ::|.|.|||:|||||||||||||:||||||||||||:.|||.||:.|.:||.|:|||||||||||
 Worm   217 VDSASKTAFISIMRGCDNMCTYCVVPFTRGRERSRPIESIVEEVQRLRDQGYKQVTLLGQNVNSY 281

  Fly   301 RDRTAQE--------EQDSLKATPVPGFSTVYKPKTGGTPFAALLRSVAQAVPDMRIRFTSPHPK 357
            ||.|:.:        ::|.     ||||.||||||:||..|..||..||.|.||:|.||||||||
 Worm   282 RDMTSMDFSMAPSTSQEDR-----VPGFKTVYKPKSGGLTFTTLLEKVADAAPDIRFRFTSPHPK 341

  Fly   358 DFSDEVLEVIRDHPNVCKQLHLPAQSGNTQVLERMRRGYSREAYLELVQHIRQFLPNVGLSSDFI 422
            ||..:::|:|...||:|||||||||||:.:.||||.|||:|:.||.||..||..||:|.|:||||
 Worm   342 DFPMQLIELIASRPNLCKQLHLPAQSGDDETLERMERGYTRDLYLRLVDDIRHVLPSVSLTSDFI 406

  Fly   423 CGFCGETEEEFQDTVSLIQQVQYNVAYLFAYSMREKTTAHRRYKDDVPINVKNERLQRMVQVFRE 487
            .|||||||:..|:|:|||:.|:|:..::|.||||.||.||.|..||||.:||..|...:..||||
 Worm   407 AGFCGETEQAHQNTLSLIRAVRYSFCFVFPYSMRGKTRAHHRLTDDVPEDVKARRHLDLTTVFRE 471

  Fly   488 GATQLHRKMEGQEQLILIEGKSKRSDAHWFGRNDANIKVIVPSIYVPISGDSTARKSFGVGDFLA 552
            .|.:|::.:.|.||.:|:||||||..:...||.|..:|.:.          ..::.....|.:..
 Worm   472 EALKLNQALIGSEQTVLLEGKSKRDASFSHGRIDGGVKAVF----------DNSKLCLEPGQYAK 526

  Fly   553 VRIEESNSQVLKGTPLELSNI 573
            :.|.::|||.||...:..|:|
 Worm   527 ILITDANSQTLKAQLIGQSSI 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6345NP_650002.1 MiaB 91..569 CDD:440386 250/485 (52%)
F25B5.5NP_498290.1 MiaB 78..543 CDD:440386 250/485 (52%)

Return to query results.
Submit another query.