DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42795 and USP6NL

DIOPT Version :10

Sequence 1:NP_001287272.1 Gene:CG42795 / 41252 FlyBaseID:FBgn0261928 Length:3213 Species:Drosophila melanogaster
Sequence 2:XP_006717605.1 Gene:USP6NL / 9712 HGNCID:16858 Length:856 Species:Homo sapiens


Alignment Length:939 Identity:187/939 - (19%)
Similarity:299/939 - (31%) Gaps:284/939 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 DEATSDYN---------------QWLHAM----------KLVARLPGGTPPEFRRKLWLSL---- 234
            :|...|:|               :||..:          |...|:..|.|.:.|.::|..|    
Human    81 EEELPDHNVAVERQKHLEIERTTKWLKMLKGWEKYKNTEKFHRRIYKGIPLQLRGEVWALLLEIP 145

  Fly   235 ------ADKYLKSKNVDWAQQREKCFCEEWREDDEELGIQIVKDLHRT-GSNLCTGPAGSINQAK 292
                  .|.|.|.|:      |.:....:.|        ||..|::|| ..::.......:.|..
Human   146 KMKEETRDLYSKLKH------RARGCSPDIR--------QIDLDVNRTFRDHIMFRDRYGVKQQS 196

  Fly   293 LKRILLGYARYNPEVGYCQGFNMLGALILQVMDKEEEESMKVMIYLVEGVLPT----GYFYGSMG 353
            |..:|..|:.||.|||||||.:.:.||:|..|:  ||::...::.|..|  |.    |:|.....
Human   197 LFHVLAAYSIYNTEVGYCQGMSQITALLLMYMN--EEDAFWALVKLFSG--PKHAMHGFFVQGFP 257

  Fly   354 GLQADMGVFRELMQTRLPRLAKHLQRLQGPVENAFEPPLTNVFTMQWFLTMFCTCLPMSCVLRVW 418
            .|........:::...|.:|.:||..         :...|:.:||:||...|....|.:..||:|
Human   258 KLLRFQEHHEKILNKFLSKLKQHLDS---------QEIYTSFYTMKWFFQCFLDRTPFTLNLRIW 313

  Fly   419 DLVLIEGSDVLLRTALVLWSLLEERV--ISVRSADEFYGKMGSYSSELLNGHLVDSNGLIERVVK 481
            |:.:.||..||...:..:..|.::.:  :|:....||      :...|......:.:.:||: ::
Human   314 DIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEF------FQETLAKDFFFEDDFVIEQ-LQ 371

  Fly   482 LGPIEDLRQLRDKHLYNIAPLRHKQGLQLYYDEEDTHSDEERLAVATVFGLNWGRRGSVG---PA 543
            :...|..|...|      .|   :.|.:..|.::........|....|..|:.|:| |||   |.
Human   372 ISMTELKRAKLD------LP---EPGKEDEYPKKPLGQLPPELQSWGVHHLSNGQR-SVGRPSPL 426

  Fly   544 AAGKQQVEQKDRLALDISLLKKQYDRLRERQKQAHVILTTACSTAARQGSGPASSSQPAVPVNQL 608
            |:|:::.....|                                  |....|...|         
Human   427 ASGRRESGAPHR----------------------------------RHEHSPHPQS--------- 448

  Fly   609 LLGRPAIVTNKGKRVGAPLGAIPPARK-------------------PSLP---------AVLHTK 645
                         |.|.|..|.||.||                   ||.|         |..:..
Human   449 -------------RTGTPERAQPPRRKSVEEESKKLKDEADFQRKLPSGPQDSSRQYNHAAANQN 500

  Fly   646 PTSEKQLRRGETLLW-RDTDPSRRRRDSLTWKEIKADRAAMIREGVDV---SSVRTQKLRTRFGK 706
            ..:...:|:.....| :.:|.|...|.:....|.|. |||.....|.|   :.||...:|.:...
Human   501 SNATSNIRKEFVPKWNKPSDVSATERTAKYTMEGKG-RAAHPALAVTVPGPAEVRVSNVRPKMKA 564

  Fly   707 SDSSSYSEDSDGEQESGTGG---GGGSSTDTSLCDDDDPKSTEKSPKQKAKLARKLKEQKQLAGS 768
            .|:......|...|.....|   ..|:|.:.:|     .::..:||:. |......::..:.:.|
Human   565 LDAEDGKRGSTASQYDNVPGPELDSGASVEEAL-----ERAYSQSPRH-ALYPPSPRKHAEPSSS 623

  Fly   769 RETSLERQRPKSWAPSSHEIPFMLMGTDSGDEKEDKSTKEGPITGDQAEDSATESGHYEFDRELH 833
            ......:...|...||....|..|.|...|.......:......|:..:...|.:..:.      
Human   624 PSKVSNKFTFKVQPPSHARYPSQLDGEARGLAHPPSYSNPPVYHGNSPKHFPTANSSFA------ 682

  Fly   834 LVSSKMEPLKLPFDPEFTGMTSVSPIPTPREKSEAEEDLLDERKPFDVSDDGVTNQYFERVNSVE 898
                         .|:|:..|.::|...|...:     |.....|               ..|..
Human   683 -------------SPQFSPGTQLNPSRRPHGST-----LSVSASP---------------EKSYS 714

  Fly   899 RPNRLELTYSLNEE-ETDTNAIYLEEREKVEGHSGDREYNSLPPFYPRENDDGVQGGGK--VPQI 960
            ||:.|.|..|..|. ..||.|         .|:||               :.|....||  :|.:
Human   715 RPSPLVLPSSRIEVLPVDTGA---------GGYSG---------------NSGSPKNGKLIIPPV 755

  Fly   961 RDDNIPGENKDDYKELLSMTIEENTVYKPPTPTASTLSNASRKRRDPRRKTLTRSSTIEIEERYQ 1025
              |.:| :|:        ...|.:..|:|.|...|...:|||...                .:|.
Human   756 --DYLP-DNR--------TWSEVSYTYRPETQGQSWTRDASRGNL----------------PKYS 793

  Fly  1026 ALERRISQDQ----PSGDRQAKYIPSTAA 1050
            |.:....||.    .|.|...:|..|.||
Human   794 AFQLAPFQDHGLPAVSVDSPVRYKASPAA 822

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42795NP_001287272.1 RabGAP-TBC 268..443 CDD:459855 50/179 (28%)
DUF4682 560..689 CDD:464830 25/157 (16%)
PTZ00121 <1112..2009 CDD:173412
PTZ00121 <1740..2340 CDD:173412
PTZ00449 <2270..2610 CDD:185628
USP6NLXP_006717605.1 TBC 125..340 CDD:214540 61/241 (25%)
PHA03247 <422..751 CDD:223021 77/454 (17%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.