DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42795 and tbc1d8b

DIOPT Version :10

Sequence 1:NP_001287272.1 Gene:CG42795 / 41252 FlyBaseID:FBgn0261928 Length:3213 Species:Drosophila melanogaster
Sequence 2:XP_009299628.1 Gene:tbc1d8b / 566657 ZFINID:ZDB-GENE-030131-3135 Length:1152 Species:Danio rerio


Alignment Length:832 Identity:173/832 - (20%)
Similarity:281/832 - (33%) Gaps:259/832 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 LVARLPGGTPPEFRRKLWL--SLADKYLKSKNVDWAQQREKCF------CEEWREDDEELGIQIV 270
            |:.|   |.|...|.:||:  |.|...:.|....:.:..|.|.      |:|           |.
Zfish   465 LIVR---GVPETLRGELWMLFSGAVHDMISHPGYYGRLLEDCMGSSSLACDE-----------IE 515

  Fly   271 KDLHRTGSNLCTGPA--GSINQAKLKRILLGYARYNPEVGYCQGFNMLGALILQVMDKEEEESMK 333
            :||||   :|...||  .....:.|:|:|..||..||::||||..|:|.:::|  :..:|||:..
Zfish   516 RDLHR---SLPEHPAFQSDTGISALRRVLTAYAHRNPKIGYCQAMNILTSVLL--LYAKEEEAFW 575

  Fly   334 VMIYLVEGVLPTGYFYGSMGGLQADMGVFRELMQTRLPRLAKHLQRLQGPVENAFEPPLTNVFTM 398
            :::.:.|.:|| .||...:.|...|..||.||::..|.:|.:|:..|.          ..:..::
Zfish   576 LLVAVCERMLP-DYFNRRIIGALVDQAVFEELIREHLTQLTEHMTDLS----------FFSSVSL 629

  Fly   399 QWFLTMFCTCLPMSCVLRVWDLVLIEGSDVLLRTALVLWSLLEERVI-------SVRSADEFYGK 456
            .||||:|.:.||:...:.|.|....:|...:|:..|.:.....:.::       :|...:.|:..
Zfish   630 SWFLTLFISVLPIESAVNVVDCFFYDGIKAILQLGLAVLDYNMDNLLCCNDDAEAVTVLNRFFDS 694

  Fly   457 MGSYSSEL-------------LNGHLVDSNGLI-ERVVKLGPI--EDLRQLRDKH-LYNIAPLRH 504
            :.:..|.|             .:...||.:.|| |...|.|.|  |::..:|.:: ||.|..|  
Zfish   695 VTNKDSPLPATVQQASATANDKSIQKVDISDLIKEAYEKYGDIRTEEVENMRKRNKLYVIQTL-- 757

  Fly   505 KQGLQLYYDEEDTHSDEERLAVATVFGLNWGRRGSVGPAAAGKQQVEQKDRLALDISLLKKQYDR 569
                      |||                            .||.|.:.  :|.|:.....|.|.
Zfish   758 ----------EDT----------------------------TKQNVLRV--VAQDVKFSASQLDE 782

  Fly   570 LRERQKQAHVILT--TACSTAARQGSGPASSSQPAVPVNQLLLGRPAIVTNKGKRVGAPLGAIPP 632
            |....|:.|.:..  :.||.|.:.                                         
Zfish   783 LYLLFKRQHFVCCYWSVCSPALQN----------------------------------------- 806

  Fly   633 ARKPSLPAVLHTKPTSEKQLRRGETLL--WRDTDPSRR-RRDSLTWKEIKADRAAMIRE---GVD 691
             ..|||| .|......:.|......||  |.....||. .|.:....:...|.....:|   |:|
Zfish   807 -HDPSLP-YLDQYQLDQSQFSSLFNLLQPWTTHTHSRSLARSAFHLLDENGDGLVNFKEFICGLD 869

  Fly   692 VSSVR--TQKLRTRF------GKSD-----SSSYSEDSDGEQESGTGGGGGSSTDTSLCDDDDPK 743
            :...|  |:||:..|      |..:     ||.:...           |...|..|.|.|..:..
Zfish   870 ILYNRSFTEKLKLLFKLHLQPGNQECKILPSSRFFPP-----------GEDHSFSTRLSDSAEDG 923

  Fly   744 STEKSPKQ---KAKLARKLKEQKQLAGSRETSLERQRPKSWAPSSHEIPFM-----LMGTDSGDE 800
            ...|.|::   |..|...||:.::....||.:::.      .|..:::.|:     |.....|||
Zfish   924 VIRKCPERGRAKVDLQEYLKQWQEDLQRREENIKD------LPRINQVQFISLTKTLYSVFHGDE 982

  Fly   801 KED-----------------------------KSTKEGPITGDQAEDSATESGHYEFDRELHLVS 836
            :|:                             |:.:..|.:..|.|.|.|:....|.:......|
Zfish   983 EEESLYRAVARVTSLLLRMEEVGRKLQDSSPQKTPQTTPTSTSQPESSPTKPTSPESETPAESRS 1047

  Fly   837 SKMEPLK-------LPFDPEFTGMTSVSPIPTPREKSEAEEDLLDERKPFDVSD------DGVTN 888
            :..:|..       .|...:.|..::..|.......:|....:||  .|.|...      ||..:
Zfish  1048 THDQPESPVSQHETAPSHSDITPNSTSHPSTPTSSPTETSSPVLD--TPTDTPSSPCTVRDGDWS 1110

  Fly   889 QYFERVNSVERPNRLELTYSLNEE----------ETDTNAIYLEEREKVEGH 930
            ..||::          |...|||.          .|||......:.:..:.|
Zfish  1111 FSFEQI----------LASLLNEPSVVRFFERVVNTDTLITRARKNQLKDAH 1152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42795NP_001287272.1 RabGAP-TBC 268..443 CDD:459855 52/176 (30%)
DUF4682 560..689 CDD:464830 22/136 (16%)
PTZ00121 <1112..2009 CDD:173412
PTZ00121 <1740..2340 CDD:173412
PTZ00449 <2270..2610 CDD:185628
tbc1d8bXP_009299628.1 PH-like 154..252 CDD:473070
PH-GRAM2_TBC1D8B 294..386 CDD:270159
TBC 468..676 CDD:214540 65/237 (27%)
PRK12495 <1028..1144 CDD:183558 25/127 (20%)
Blue background indicates that the domain is not in the aligned region.

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