DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42795 and CG12241

DIOPT Version :10

Sequence 1:NP_001287272.1 Gene:CG42795 / 41252 FlyBaseID:FBgn0261928 Length:3213 Species:Drosophila melanogaster
Sequence 2:NP_650432.1 Gene:CG12241 / 41834 FlyBaseID:FBgn0038304 Length:804 Species:Drosophila melanogaster


Alignment Length:394 Identity:95/394 - (24%)
Similarity:172/394 - (43%) Gaps:69/394 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 WLHAMKLVAR-------LPGGTPPEFRRKLWLSLADKYLKSKNVDWAQQREKCF---CEEWREDD 262
            |.|...::.|       :..|.|...|.::|:.|:....|.      |:.|..:   .:....|.
  Fly   144 WEHVDVMLPRTEKLRNMVRQGIPHTLRAQMWMRLSGALAKK------QKSETSYHDIVKASSNDQ 202

  Fly   263 EELGIQIVKDLHR-TGSNLCTGPAGSINQAKLKRILLGYARYNPEVGYCQGFNMLGALILQVMDK 326
            .....||.|||.| ..:|.|..........:|:|||.|.|...|::|||||..::.|.:|..|  
  Fly   203 LMTSKQIEKDLLRILPTNACFSNPNGTGIPRLRRILRGIAWLFPDIGYCQGTGVIVACLLLFM-- 265

  Fly   327 EEEESMKVMIYLVEGVLPTGYFYGSMGGLQADMGVFRELMQTRLPRLAKHLQRLQGPVENAFEPP 391
            |||.:..:|..:||.:||..|:..::.|:|||..|...|:...|..:.:.|::  ..:|      
  Fly   266 EEENAFWMMATIVEDLLPASYYSSTLLGIQADQRVMHTLIANYLSSVDESLRK--HDIE------ 322

  Fly   392 LTNVFTMQWFLTMFCTCLPMSCVLRVWDLVLIEGSDVLLRTALVLWSLLEERVISVRSADEFYGK 456
             .::.|:.||||:|...:.|..::|:||....|||.||.:..|.:..:.|:.:..:.::.:.:..
  Fly   323 -LSLITLHWFLTLFANVVHMKILVRIWDWFFYEGSIVLFQLTLGMLKVKEQDLKHLENSAQIFNS 386

  Fly   457 MGSYSSELLNGHLVDSNGLIERVVKLGPIEDLRQL-----RDKHLYNIAPLRHKQGLQLYYDEED 516
            :..     :.|.:.|...|..:.:::|  ..|.|.     |.:||   |.|...||.|:...|..
  Fly   387 LSD-----IPGEVTDVEVLFRQALEVG--GSLSQTVIDTHRRRHL---AYLMADQGHQIGNPEAA 441

  Fly   517 THSDEERLAVATVFGLNWGRRGSVGPAAAGKQQVEQKDRLALDISLLK---KQYDRLRERQ-KQA 577
            .:..:::||                     ::|| :|.:..|:..|.:   .:.|:|:.:. :|.
  Fly   442 PNLPKQQLA---------------------RRQV-RKSKSILEAFLFRGDGNEGDQLKNKNIRQT 484

  Fly   578 HVIL 581
            .:::
  Fly   485 EILV 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42795NP_001287272.1 RabGAP-TBC 268..443 CDD:459855 58/175 (33%)
DUF4682 560..689 CDD:464830 4/26 (15%)
PTZ00121 <1112..2009 CDD:173412
PTZ00121 <1740..2340 CDD:173412
PTZ00449 <2270..2610 CDD:185628
CG12241NP_650432.1 TBC 161..375 CDD:214540 67/230 (29%)
SH3_SGSM3 540..592 CDD:212747
RUN_SGSM3 570..783 CDD:439050
Blue background indicates that the domain is not in the aligned region.

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