DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42795 and GAPsec

DIOPT Version :10

Sequence 1:NP_001287272.1 Gene:CG42795 / 41252 FlyBaseID:FBgn0261928 Length:3213 Species:Drosophila melanogaster
Sequence 2:NP_648245.2 Gene:GAPsec / 38987 FlyBaseID:FBgn0035916 Length:403 Species:Drosophila melanogaster


Alignment Length:450 Identity:87/450 - (19%)
Similarity:144/450 - (32%) Gaps:151/450 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 QLAQLASGMVGDRSSLERLDVRKLIDVCAILKVEILMLGYLLERVLVARDRLQRHQEVLCEFVTA 109
            ||.:||...|.|..|...|..:             |:||||..|.......|.:.:.:..:|:..
  Fly    26 QLRKLAFNGVPDVQSFRALSWK-------------LLLGYLGPRRSSWTTTLAQKRALYKQFIEE 77

  Fly   110 VLIVESDDAQPKMRFSLSPPPQKAITSARLTSPTKNSLSSNNTITTPGSNNRSPSSTKTTMLTRN 174
            :::               ||..                          |:||:...         
  Fly    78 LVL---------------PPGH--------------------------SSNRASVD--------- 92

  Fly   175 GGGHGTSPTASGSGHAPSATAAADDEATSDY---NQWLHAM-KLVARL---------PGGTP--- 223
             ||.|....:.|.|......:...:.|.:.:   |::|..: |.|.||         |...|   
  Fly    93 -GGDGDKVDSGGVGLQDHPLSEGPESAWNTFFNDNEFLLQIDKDVRRLCPDISFFQQPTDYPCEI 156

  Fly   224 -----PEFRRKLWLSLADKYLKSKNVDWAQQREKCFCEEWREDDEELGIQIVKDLHRTGSNLCTG 283
                 .|..|:|...:....|.|.||:                        .|.|..|..||.|.
  Fly   157 VVHSKGEHGRRLHERVVPAVLSSANVE------------------------RKGLGMTKINLITK 197

  Fly   284 PA----GSINQAK------LKRILLGYARYNPEVGYCQGFNMLGALILQVMDKE---------EE 329
            .:    .::.:.:      ::|||..||:.||..||.||.|.:...|..||..:         |.
  Fly   198 RSVENYAAMEEGQEAHWEVVQRILFIYAKLNPGQGYVQGMNEIVGPIYYVMASDPDLTYRAHAEA 262

  Fly   330 ESMKVMIYLVEGVLPTGYFYGSMGGLQADMGVFRELMQTRLPRLAK-------HLQRLQGPVENA 387
            :.......|:..:  ..:|..::.  .|:.|:  :.|..||..:.|       .|.|.|     .
  Fly   263 DCFFCFTALMSEI--RDFFIKTLD--DAEGGI--KFMMARLSNMLKSKDLSIYELLRSQ-----E 316

  Fly   388 FEPPLTNVFTMQWFLTMFCTCLPMSCVLRVWDLVLIEGS--DVLLRTALVLWSLLEERVI 445
            ..|   ..::.:|...:.....|:..|||:||.|..:..  |.|::....:..:..|.::
  Fly   317 LHP---QYYSFRWLTLLLSQEFPLPDVLRIWDSVFADEQRFDFLIKICCSMILIQREAIL 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42795NP_001287272.1 RabGAP-TBC 268..443 CDD:459855 44/202 (22%)
DUF4682 560..689 CDD:464830
PTZ00121 <1112..2009 CDD:173412
PTZ00121 <1740..2340 CDD:173412
PTZ00449 <2270..2610 CDD:185628
GAPsecNP_648245.2 TBC <191..373 CDD:214540 42/195 (22%)
Blue background indicates that the domain is not in the aligned region.

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