DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42795 and Tbc1d10c

DIOPT Version :10

Sequence 1:NP_001287272.1 Gene:CG42795 / 41252 FlyBaseID:FBgn0261928 Length:3213 Species:Drosophila melanogaster
Sequence 2:NP_001075449.1 Gene:Tbc1d10c / 361697 RGDID:1311490 Length:446 Species:Rattus norvegicus


Alignment Length:561 Identity:143/561 - (25%)
Similarity:198/561 - (35%) Gaps:176/561 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 GSNNRSPSSTKTTMLTRNG--GGHGTSPTASGSGHAPSATAAADDEATSDYNQW----LHAMKLV 215
            ||::....|:......|.|  ||:...   .|.|..|:      |.......:|    ||..|.:
  Rat    23 GSDSEISGSSPYRQADRYGFIGGNSAE---LGLGQPPA------DLIRQREMKWVEMTLHWEKTM 78

  Fly   216 AR--------LPGGTPPEFRRKLWLSLADKYLKSKNVDWAQQREKCFC---EEWREDDEELGIQI 269
            :|        ...|.|...|.:.|..|...::..||.....| |....   .:|.|       .|
  Rat    79 SRRYKKVKIQCRKGIPSALRARCWPLLCGAHMCQKNNPGTYQ-ELAVAPGDPQWME-------TI 135

  Fly   270 VKDLHRTG--SNLCTGPAGSINQAKLKRILLGYARYNPEVGYCQGFNMLGALILQVMDKEEEESM 332
            .:||||..  ..:...|.|. .|..|.::|..|..|.||.||||....:.|::|  |....||:.
  Rat   136 GRDLHRQFPLHEMFVSPQGH-GQQGLLQVLKAYTLYRPEQGYCQAQGPVAAVLL--MHLPPEEAF 197

  Fly   333 KVMIYLVEGVLPTGYFYGSMGGLQADMGVFRELMQTRLPRLAKHLQRL-QGPVENAFEPPLTNVF 396
            ..::.:.|..|| ||:...|..:|.|..||..|::..|||:.||||:: .||:          ::
  Rat   198 WCLVQICEVYLP-GYYGPHMEAVQLDAEVFMALLRRLLPRVYKHLQQVGVGPL----------LY 251

  Fly   397 TMQWFLTMFCTCLPMSCVLRVWDLVLIEGSDVLLRTALVLWSLLEERVISVRSADEFYGKMGSYS 461
            ..:|||.:|...||...|||:||..|.||:.||.|..|.|..|                      
  Rat   252 LPEWFLCLFTRSLPFPIVLRIWDAFLSEGAKVLFRAGLTLMRL---------------------- 294

  Fly   462 SELLNGHLVDSNGLIE-RVVKLGPIEDLRQLRDKHLYNIAPLRHKQGLQLYYDEEDTHSDEERLA 525
                      :.|.:| |....|.:|.|..||     .|.|               |...||   
  Rat   295 ----------ALGTVEQRTACPGLLETLGALR-----TIPP---------------TQLQEE--- 326

  Fly   526 VATVFGLNWGRRGSVGPAAAGKQQVEQKDRLALDISLLKKQYDRLRERQKQAHVILTTACSTAAR 590
               ||                   :.|...:||.            ||..|..:.:..|      
  Rat   327 ---VF-------------------MSQVHNVALS------------ERDLQREIRIQLA------ 351

  Fly   591 QGSGPASSSQPAVPVNQLLL-GRPAIVTNK---GKRVGAPLGAIPPARKPSLPAVL-----HTKP 646
              ..|.||..| ||:.|..| |..||..::   |.|.||         ||.:|.::     ...|
  Rat   352 --QLPKSSPGP-VPLPQARLPGAQAIFESQQLAGMRGGA---------KPEIPRIVVQPPEEPNP 404

  Fly   647 TSEKQLRRGET---LLWRD-----TDPSRRRRDSLTWKEIK 679
            ...|...||:|   ||.|.     ..|||..|.|.::.:.:
  Rat   405 PRRKPQTRGKTFHGLLIRARGPPIEGPSRSHRGSASFLDTR 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42795NP_001287272.1 RabGAP-TBC 268..443 CDD:459855 63/177 (36%)
DUF4682 560..689 CDD:464830 35/137 (26%)
PTZ00121 <1112..2009 CDD:173412
PTZ00121 <1740..2340 CDD:173412
PTZ00449 <2270..2610 CDD:185628
Tbc1d10cNP_001075449.1 TBC 89..294 CDD:214540 73/226 (32%)
Blue background indicates that the domain is not in the aligned region.

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