DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42795 and RABGAP1

DIOPT Version :10

Sequence 1:NP_001287272.1 Gene:CG42795 / 41252 FlyBaseID:FBgn0261928 Length:3213 Species:Drosophila melanogaster
Sequence 2:NP_036329.3 Gene:RABGAP1 / 23637 HGNCID:17155 Length:1069 Species:Homo sapiens


Alignment Length:742 Identity:151/742 - (20%)
Similarity:277/742 - (37%) Gaps:196/742 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 YLLE---RVLVARDRL---------------------QRHQEVLCEFVTAVLIVESDDAQPKMRF 124
            :|||   ||....:||                     ||.::...:.:..|:.:||:..:.:.:.
Human   424 FLLETKVRVCSPNERLFWPFSKRSTTENFFLKLKQIKQRERKNNTDTLYEVVCLESESERERRKT 488

  Fly   125 SLSPP---PQKAITSARLTSPTKNSLSSNNTITTPGSNNRSPSSTKTTMLTRNGGGHGTSPTASG 186
            :.||.   ||....|:.:.||.::....:|                            ..|..||
Human   489 TASPSVRLPQSGSQSSVIPSPPEDDEEEDN----------------------------DEPLLSG 525

  Fly   187 SGHAPSATAAADDEATSD-YNQW-----LHAMKLVARLPGGTPPEFRRKLWLSLADKYLKSKNVD 245
            ||......|....|...: .::|     :...:|.:.:..|.|...|.::|..||..:    |.|
Human   526 SGDVSKECAEKILETWGELLSKWHLNLNVRPKQLSSLVRNGVPEALRGEVWQLLAGCH----NND 586

  Fly   246 WAQQREKCFCEEWREDDEELGIQIVKDLHRTGSNLCTGPA-------GSINQAKLKRILLGYARY 303
            ...::.:....:....|.    .|.:|::|      |.||       |...|..|.:|...|:.|
Human   587 HLVEKYRILITKESPQDS----AITRDINR------TFPAHDYFKDTGGDGQDSLYKICKAYSVY 641

  Fly   304 NPEVGYCQGFNMLGALILQVMDKEEEESMKVMIYLVEGVLPTGYFYGSMGGLQADMGVFRELMQT 368
            :.|:|||||.:.|.|::|..|.:|:..|:.|.|....|:  ...|..:...|.........|||.
Human   642 DEEIGYCQGQSFLAAVLLLHMPEEQAFSVLVKIMFDYGL--RELFKQNFEDLHCKFYQLERLMQE 704

  Fly   369 RLPRLAKHLQRLQGPVENAFEPPLTNVFTMQWFLTMFCTCLPMSCVLRVWDLVLIEGSDVLLRTA 433
            .:|.|..|.      ::.:.|   .:::..|||||:|....|:..|..:.||:|.||..|:...|
Human   705 YIPDLYNHF------LDISLE---AHMYASQWFLTLFTAKFPLYMVFHIIDLLLCEGISVIFNVA 760

  Fly   434 LVLWSLLEERVISVRSADEFYGKMGSYSSELLNGHLVDSNGLIERVVKLGPIEDLRQLRDKHLYN 498
            |.|....::.::    ..:|.|.:..:..:|...:..:.|.  :::::|.....:.|.:      
Human   761 LGLLKTSKDDLL----LTDFEGALKFFRVQLPKRYRSEENA--KKLMELACNMKISQKK------ 813

  Fly   499 IAPLRHKQGLQLYYDEEDTHSDEERLAVATVFGLNWGRRGSVGPAAAGKQQVEQKDRLALDISLL 563
                     |:.|  |::.|:..|                         ||.:|:|    .|...
Human   814 ---------LKKY--EKEYHTMRE-------------------------QQAQQED----PIERF 838

  Fly   564 KKQYDRLRE---RQKQ-----AHVILTTACSTAARQGSGPASSSQPAVPVNQLLLGRPAIVTNKG 620
            :::..||:|   |.:|     ||.::|:  ..|.|:....|.....|:....|:..:..|...:.
Human   839 ERENRRLQEANMRLEQENDDLAHELVTS--KIALRKDLDNAEEKADALNKELLMTKQKLIDAEEE 901

  Fly   621 KRVGAPLGAIPPARKPSLPAVLHTKPTSEKQLRRGETLLWRDTDPSRRRRDSL--TWKEIKADRA 683
            ||           |.....|.|  |....::|.:.|:.:        ::..|:  .:|:|.:..:
Human   902 KR-----------RLEEESAQL--KEMCRRELDKAESEI--------KKNSSIIGDYKQICSQLS 945

  Fly   684 AMIREGVDVSSVRTQKLRTRFGKSDSSSYSEDSDGEQESGTGGGGGSSTDTSLCDDDDPKSTEKS 748
            ..:.:....:.|..:|:|.:....:......:.:|..:      |.|||...|.:|.|       
Human   946 ERLEKQQTANKVEIEKIRQKVDDCERCREFFNKEGRVK------GISSTKEVLDEDTD------- 997

  Fly   749 PKQKAKLARKLKEQK-QLAGSRETSLE 774
             ::|..|..:|:|.: :||   :|.|:
Human   998 -EEKETLKNQLREMELELA---QTKLQ 1020

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42795NP_001287272.1 RabGAP-TBC 268..443 CDD:459855 53/181 (29%)
DUF4682 560..689 CDD:464830 26/138 (19%)
PTZ00121 <1112..2009 CDD:173412
PTZ00121 <1740..2340 CDD:173412
PTZ00449 <2270..2610 CDD:185628
RABGAP1NP_036329.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..79
PTB_Rab6GAP 145..273 CDD:269922
DUF3694 307..437 CDD:463599 5/12 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 482..527 11/72 (15%)
TBC 563..772 CDD:214540 62/233 (27%)
SMC_prok_B <825..>1032 CDD:274008 50/265 (19%)
Blue background indicates that the domain is not in the aligned region.

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