DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAH7 and Ca5b

DIOPT Version :10

Sequence 1:NP_649979.1 Gene:CAH7 / 41238 FlyBaseID:FBgn0037788 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_001005551.1 Gene:Ca5b / 302669 RGDID:1549783 Length:317 Species:Rattus norvegicus


Alignment Length:259 Identity:78/259 - (30%)
Similarity:132/259 - (50%) Gaps:41/259 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 PKWGG--LCDSGKKQSPINLHVKGALKGEFDALKFENYDEHQKN----------LRMVNNGHS-- 86
            |.|..  |..:|.:|||||:..:.::           ||...|.          |.:.|||:|  
  Rat    50 PLWENLDLVPAGDRQSPINIRWRDSV-----------YDPGLKPLTISYDPATCLHIWNNGYSFL 103

  Fly    87 IQLSGFDHELTLSGGALLQDFVVEQIHMHW-----W-SEHTINDIRYPLEVHIVHRNTI-YPNMT 144
            ::......:..:.||.|..::.::|.|.||     | ||||::...||.|:|:||.|.: :.:..
  Rat   104 VEFEDTTDKSVIEGGPLEHNYRLKQFHFHWGAIDAWGSEHTVDSKCYPAELHLVHWNAVKFESFE 168

  Fly   145 MAANFKDGIVVIGVLYHVSNTPNEAIGSIIKSLGAVKSYDSMNKPVLVADSLAVDDLVPSVENYF 209
            .||..::|:.||||...:.....| :..::.:|.::|..|::.|    ..|.....|:|:..:|:
  Rat   169 DAALEENGLAVIGVFLKLGKHHKE-LQKLVDTLPSIKHKDTLVK----FGSFDPSCLMPTCPDYW 228

  Fly   210 TYAGSLTTPTCAEAVTWIVLTETFPVTLDQVNEFKEI----EYDEGKQLHNNYRELQSENNRAV 269
            ||:||||||..:|:||||:..:...|..||:.:|:.:    |.::.|::.:|:|.||...||.|
  Rat   229 TYSGSLTTPPLSESVTWIIKKQPVEVDHDQLEQFRTLLFTSEGEKEKRMVDNFRPLQPLMNRTV 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH7NP_649979.1 Carb_anhydrase 38..269 CDD:459707 76/255 (30%)
Ca5bNP_001005551.1 alpha_CA 61..296 CDD:469577 75/248 (30%)

Return to query results.
Submit another query.