DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH7 and Ca6

DIOPT Version :10

Sequence 1:NP_649979.1 Gene:CAH7 / 41238 FlyBaseID:FBgn0037788 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_001128313.1 Gene:Ca6 / 298657 RGDID:70516 Length:312 Species:Rattus norvegicus


Alignment Length:287 Identity:83/287 - (28%)
Similarity:136/287 - (47%) Gaps:37/287 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IALSLIVCCSVSFSWANEWGYPDLDNNQDEPFPKWGGLCDSGKKQSPIN-----LHVKGALKGEF 63
            :.:|::....:.....:||.|...|..::..:|:....| .|::||||:     :|...:|.   
  Rat     3 VLVSVVSLFFLGIQALSEWSYSGDDGLEESRWPEKYPSC-GGERQSPIDVKRREVHFSSSLL--- 63

  Fly    64 DALKFENYDEHQKNLRMVNNGHSIQLSGFDHELTLSGGALLQD-----FVVEQIHMHW------- 116
             .|...||:|....|.|.||||::|       :||.....::|     :..:|:|.||       
  Rat    64 -PLHMVNYEEEGLELSMTNNGHTVQ-------ITLPNTMSMRDSDGTVYRTKQMHFHWGGRDSEI 120

  Fly   117 -WSEHTINDIRYPLEVHIVHRNTIYPNMTMAANFKDGIVVIGVLYHVSN-TPNEAIGSIIKSLGA 179
             .|||||:.:|:.:|:|:||.|..|.....|.:..||:.|:.||..|.: |.|:...:.|..|..
  Rat   121 SGSEHTIDGMRHAIEIHLVHFNEKYETYEKAVDQPDGLAVMAVLVKVEDYTENDYYSTFISELEN 185

  Fly   180 VKSYDSMNKPVLVADSLAVDDLVP-SVENYFTYAGSLTTPTCAEAVTWIVLTETFPVTLDQVNEF 243
            || |......:   .::.:.:::| .:.:|:||.||||||.|.|.|.|.|..::..::..|....
  Rat   186 VK-YTGQTTTL---RNVNIRNMLPGDIRHYYTYQGSLTTPPCTENVKWFVFQDSATISKAQAERI 246

  Fly   244 KEIEYDEGKQ-LHNNYRELQSENNRAV 269
            :....|...| :.|.||..|..:||.|
  Rat   247 ENAVMDHHNQTIRNGYRRTQPLHNRVV 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH7NP_649979.1 Carb_anhydrase 38..269 CDD:459707 76/251 (30%)
Ca6NP_001128313.1 alpha_CA_VI 30..278 CDD:239399 78/260 (30%)

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