DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAH7 and cah-2

DIOPT Version :10

Sequence 1:NP_649979.1 Gene:CAH7 / 41238 FlyBaseID:FBgn0037788 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_495567.3 Gene:cah-2 / 174218 WormBaseID:WBGene00000280 Length:337 Species:Caenorhabditis elegans


Alignment Length:269 Identity:67/269 - (24%)
Similarity:120/269 - (44%) Gaps:55/269 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 WG------GLCDSGKKQSPINLHVKGALKGEFDALKFENYDEHQKNLRMVNNGHSIQLSGFDH-- 94
            ||      .:|.:|:.|||:|:.....|           ||.|   |..:|...:|..:.|::  
 Worm    20 WGLLHGDWRMCTAGQMQSPVNIDPSQLL-----------YDPH---LMPINIEGNIVEAVFENTG 70

  Fly    95 --------------ELTLSGGALL-QDFVVEQIHMHW--------WSEHTINDIRYPLEVHIV-H 135
                          .:.::||..: ..:.:.||.:|:        .||||::.:|:|.|:.:: :
 Worm    71 QLPVVTVKDLPNRPTINITGGPTMPYRYKLHQISVHFGRADEGEKGSEHTVDRVRFPAEIQLLAY 135

  Fly   136 RNTIYPNMTMAANFKDGIVVIGVLYHVSNTPNEAIGSIIKSLGAVKSYDSMNKPVLVADSLAVDD 200
            .:.:|||.::|.....|::.:.|:..:..|.:..:..:..   |.:|.:...:...:.| .....
 Worm   136 NSALYPNFSVAMTSPRGLLAVSVIVDIGKTTSVELRRLTV---ASQSINYKGQTTNLTD-FQPSA 196

  Fly   201 LVPSVENYFTYAGSLTTPTCAEAVTWIVLTETFPVTLDQVNEFKEIEYDEGKQ-----LHNNYRE 260
            |:|...:|.||.||||.|.|.|.|||::|.....:|.|.:..:.|::..|.||     :...||.
 Worm   197 LLPKTSHYVTYEGSLTFPGCHETVTWVILNNPIYITNDDLQIWNEMQKTETKQPEPSYMTPAYRP 261

  Fly   261 LQSENNRAV 269
            |:|.|.|.|
 Worm   262 LKSLNGRLV 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH7NP_649979.1 Carb_anhydrase 38..269 CDD:459707 66/267 (25%)
cah-2NP_495567.3 alpha_CARP_X_XI_like 16..275 CDD:239395 67/269 (25%)

Return to query results.
Submit another query.