DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAH7 and LOC116406730

DIOPT Version :10

Sequence 1:NP_649979.1 Gene:CAH7 / 41238 FlyBaseID:FBgn0037788 Length:304 Species:Drosophila melanogaster
Sequence 2:XP_031747338.1 Gene:LOC116406730 / 116406730 XenbaseID:XB-GENE-29091891 Length:279 Species:Xenopus tropicalis


Alignment Length:289 Identity:84/289 - (29%)
Similarity:126/289 - (43%) Gaps:42/289 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LIALSLIVCCSVSFSWANEWGYPDLDNNQDEP------FPKWGGLCDSGKKQSPINLHVKGAL-K 60
            ||.||.:.....|..|.       .|:.:..|      :|..|     ...|||||:.....: .
 Frog     6 LIVLSHLALLGHSADWC-------YDHEECAPSHWYLHYPSCG-----LSSQSPINIITANTVAD 58

  Fly    61 GEFDALKFENYDEHQKNLRMVNNGHSIQLSGFDHELTLSGGALLQDFVVEQIHMHW--------W 117
            .....:..|..|...:. .:.|||||:::: ...:.||||..|...:.:...|:|:        .
 Frog    59 SSLGPIVVEGSDATSEG-ELTNNGHSVEVT-LTSKYTLSGAGLTDAYTLAGFHIHFGNSNPTFGG 121

  Fly   118 SEHTINDIRYPLEVHIVHRNTIYPNMTMAANFKDGIVVIGVLYHVSNTPNEAIGSIIKSLGAVKS 182
            |||.||...:|||||.|..|:||.::|.|....||:.|:|||:.:.:. |.|:...:..|..| :
 Frog   122 SEHQINGNAFPLEVHFVFYNSIYIDLTEAKQQSDGLAVVGVLFQIGSF-NSALDHFLGQLSQV-A 184

  Fly   183 YDSMNKPVLVADSLAVDDLVPS-VENYFTYAGSLTTPTCAEAVTWIVLTETFPVTLDQVNEFKEI 246
            |......|    ...:...:|: :..||.|.||||||||:|.|||:|.....|::|.|..:....
 Frog   185 YSGQKTSV----QANLRKFLPAKIGYYFKYNGSLTTPTCSENVTWLVAGNVQPISLSQYTQIISN 245

  Fly   247 EY------DEGKQLHNNYRELQSENNRAV 269
            .|      .....:.:|:|..|..|.|.|
 Frog   246 LYFSLPGAANPVPMLDNFRPTQPLNGRTV 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH7NP_649979.1 Carb_anhydrase 38..269 CDD:459707 74/246 (30%)
LOC116406730XP_031747338.1 Carb_anhydrase 30..274 CDD:459707 76/256 (30%)

Return to query results.
Submit another query.