DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alp13 and pho8

DIOPT Version :10

Sequence 1:NP_649978.2 Gene:Alp13 / 41236 FlyBaseID:FBgn0037786 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_596739.1 Gene:pho8 / 2539926 PomBaseID:SPBC14F5.13C Length:532 Species:Schizosaccharomyces pombe


Alignment Length:404 Identity:83/404 - (20%)
Similarity:158/404 - (39%) Gaps:131/404 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KSTQVFLVAGTCLITVMVTLLCIGFMTRYEVENDVANVADVDYWKDKVATSQKIWYDKGIDE--- 78
            ::.:.::..|..||.|:.|::...|.:.::                          .||.:|   
pombe    22 RNWKTWIKHGILLILVLSTVIFFYFFSSHK--------------------------SKGTNEKPK 60

  Fly    79 -----LNEALRPQDLTYPKNVRIFVIQGIDGRDWAAFRFPT------SDASRGNTNFIWDRFPHL 132
                 :::.:.|..|:..::    .::.::.::  .:|.|.      |..:|.:::.|.|     
pombe    61 FVIMMVSDGMGPGSLSMTRS----FVETLNDKE--GYRLPLDEHLIGSSRTRSSSSLITD----- 114

  Fly   133 ARLKNSCSQQFPCQVASVSRALWLGIPLDKVPDNQQDCGRLFNATQGPISILRQAQLAGLRTGFV 197
               ..:.:..|.|...:.:.|:       .|.||::.||          :||..|:.||..||.|
pombe   115 ---SAAGATAFSCANKTYNGAV-------GVLDNEKPCG----------TILEAAKEAGYLTGIV 159

  Fly   198 TTQRITGPTGAAL-GNANGNFECDESMPLNSIKSGCQDIAQQLISD------ETGKFLNVLIGGG 255
            .|.|:|..|.|:. .:|...|                  .|.||::      ..|:.:::|.|||
pombe   160 VTSRVTDATPASFSAHAANRF------------------MQDLIAEYQVGMGPLGRSVDLLFGGG 206

  Fly   256 RQMLSSLVPNTKYDPVDEMLCESNDGRNLLKDWRNQKLKESKINRIIFDLIQRRDELESLNSSSF 320
               |.|.:|.:.|     ..|.| |..:|||..|.   ||.      |.::..|.:.:.|:::..
pombe   207 ---LCSFLPKSTY-----RSCRS-DNLDLLKYARK---KEG------FQILLNRTDFDELSNAQL 253

  Fly   321 DYLMGVMANGDLSGN-----SKAPSLKLMVDKSLNVLTK-----YKQGYLLIVEQFIPSGIDKRE 375
            . |:|:.::..||.:     ...|.|..||:.:|:||..     ..:|:.|::|   .|.||...
pombe   254 P-LLGLFSDYHLSYDIDYQPEVQPKLSEMVETALDVLLNATNEDTSKGFFLLIE---GSRIDMAS 314

  Fly   376 QLQLLNDTLVNLHK 389
            .   .||.:.::::
pombe   315 H---NNDPIAHVYE 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp13NP_649978.2 ALP_like 127..472 CDD:474031 67/280 (24%)
pho8NP_596739.1 PhoA 29..486 CDD:441391 83/397 (21%)

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