DRSC/TRiP Functional Genomics Resources

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Protein Alignment Teh1 and Kcnmb4

DIOPT Version :10

Sequence 1:NP_001262442.1 Gene:Teh1 / 41215 FlyBaseID:FBgn0037766 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_076450.1 Gene:Kcnmb4 / 66016 RGDID:620728 Length:210 Species:Rattus norvegicus


Alignment Length:199 Identity:52/199 - (26%)
Similarity:80/199 - (40%) Gaps:43/199 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 LAFFSVTAGASLLFLVPL-YVDPAISTLSHDFIEKPTLCTTTRREDLVGIFNCSWSSCREGC--T 112
            |..|.:.:|...||:... ::.||:    .|.......||....:.:..:|.|:: :|...|  |
  Rat    20 LGLFLIVSGILSLFIFGFCWLSPAL----QDLQATAANCTVLSVQQIGEVFECTF-TCGTDCRGT 79

  Fly   113 SDLYRCVHIYVTFIEQNITIPENMTDYSNFTSDMEQSGEATLLVNIKGCGY-PPSVTCK------ 170
            |. |.||.:||...|.|        ..:...||..|     ||.|.| |.| ||   ||      
  Rat    80 SQ-YPCVQVYVNNSESN--------SRALLHSDQHQ-----LLTNPK-CSYIPP---CKRENQKN 126

  Fly   171 -----NFNGYY--GIEGAIFPCFYSRKNKTV-VLTSYNHDDQVAMIIHFFAVPFVITVISSIALC 227
                 |:..|:  .|....|.|::::..:.. ||....||:.|  ::|.|..|.|..|:..:.:.
  Rat   127 SESVMNWQQYWKDEIGSQPFTCYFNQHQRPEDVLLQRTHDEIV--LLHCFLWPVVAFVVGVLIVV 189

  Fly   228 IMHC 231
            :..|
  Rat   190 LTIC 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Teh1NP_001262442.1 TipE 37..>221 CDD:374913 50/187 (27%)
Kcnmb4NP_076450.1 CaKB 8..203 CDD:460838 52/199 (26%)

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