DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16904 and AT3G06460

DIOPT Version :10

Sequence 1:NP_649957.1 Gene:CG16904 / 41212 FlyBaseID:FBgn0037763 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_187297.1 Gene:AT3G06460 / 819823 AraportID:AT3G06460 Length:298 Species:Arabidopsis thaliana


Alignment Length:250 Identity:60/250 - (24%)
Similarity:115/250 - (46%) Gaps:50/250 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 IIITVYL--LFVLK--------LGRKLMDKHEALQLRGVLKFYNIGQVLF-NSVIFVWGIHLLFV 79
            :::::||  .|:|:        ||.::        |:.:...:::  :|| .|:....|..|..:
plant    38 VVVSLYLSATFLLRYTVDSLPTLGPRI--------LKPITAVHSL--ILFLLSLTMAVGCTLSLI 92

  Fly    80 Q------KPYNLSCMQVLPQDHELKSTERTLSYMYHLNKVLDLMDTIFFVLRKKQRQITFLHVFH 138
            .      :.::..|   .|.|.:.|......:.:::|:|:|:.:||:..:|.|..::::||||:|
plant    93 SSSDPKARLFDAVC---FPLDVKPKGPLFFWAQVFYLSKILEFVDTLLIILNKSIQRLSFLHVYH 154

  Fly   139 HVFMVFTSHMLIR----FYGFGGHVFLICMFNVLVHIVMYGYYYASSQSQNVQESLWWKKYLTLG 199
            |..:|...::.:|    .:..|      .:.|..||::|||||:..:.....:    |||.:|..
plant   155 HATVVILCYLWLRTRQSMFPVG------LVLNSTVHVIMYGYYFLCAIGSRPK----WKKLVTNF 209

  Fly   200 QLVQFLL-MFLHCMYT----YFQPNCSASRGVIYVISSASAFMFLMFTKFYIKTY 249
            |:|||.. |.|...:.    ||...| |....:|.....:|.:..:|..|:.|.|
plant   210 QMVQFAFGMGLGAAWMLPEHYFGSGC-AGIWTVYFNGVFTASLLALFYNFHSKNY 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16904NP_649957.1 ELO 16..257 CDD:460083 59/249 (24%)
AT3G06460NP_187297.1 ELO 28..270 CDD:460083 59/249 (24%)

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