DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16904 and elo2

DIOPT Version :10

Sequence 1:NP_649957.1 Gene:CG16904 / 41212 FlyBaseID:FBgn0037763 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_593930.2 Gene:elo2 / 2542505 PomBaseID:SPAC1B2.03C Length:327 Species:Schizosaccharomyces pombe


Alignment Length:281 Identity:84/281 - (29%)
Similarity:136/281 - (48%) Gaps:54/281 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PVQLPLAGSIRTSVII-ITVYLLFVLKLGRKLMDKHEALQLRGVLKFYNIGQVLFNSVIFVWGIH 75
            |.:.|:  |..:|||: ||.|.:.:|. ||.:|...:.|:.|.:.:.:|....:.:..:....:.
pombe    40 PGKTPM--SQWSSVIVSITAYYVIILS-GRAIMTNRKPLKQRRLFQLHNFILTIISGALLALLVE 101

  Fly    76 LLFVQKPYNLSCMQVLPQDHELKSTER--TLSYMYHLNKVLDLMDTIFFVLRKKQRQITFLHVFH 138
            .:|.....|.....|....|   .|:|  ||.|:.:|.|.|:||||:|..|:||  .:.|||.:|
pombe   102 EVFRNYMRNGLFYCVCDSRH---FTQRLVTLYYLNYLTKYLELMDTVFLFLKKK--PLAFLHCYH 161

  Fly   139 H---VFMVFTSHMLIRFYGFGGHVFLICMFNVLVHIVMYGYYYASSQSQNVQESLWWKKYLTLGQ 200
            |   ..:.|| .:|.|.....|.:.|    |:.||::||.||:.::..:.|    |||:::|..|
pombe   162 HGITALLCFT-QLLGRTSVQWGVIGL----NLYVHVIMYSYYFLAACGRRV----WWKQWVTRVQ 217

  Fly   201 LVQFLL--------MFLHCMYTYFQ-----PNCSASR-------GVIYVISSASAFMFLMFTKFY 245
            ::||:|        .:.|..:.||.     .:||.|.       ||:      |:::|| |..||
pombe   218 IIQFVLDLILCYFGTYSHIAFRYFPWLPHVGDCSGSLFAAFFGCGVL------SSYLFL-FIGFY 275

  Fly   246 IKTYI----RPKEVKSKGKVN 262
            |.|||    :..:.|:.||.:
pombe   276 INTYIKRGAKKNQRKAAGKAD 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16904NP_649957.1 ELO 16..257 CDD:460083 80/270 (30%)
elo2NP_593930.2 ELO 43..286 CDD:460083 80/266 (30%)

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