DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16904 and elo-6

DIOPT Version :10

Sequence 1:NP_649957.1 Gene:CG16904 / 41212 FlyBaseID:FBgn0037763 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_500797.1 Gene:elo-6 / 177321 WormBaseID:WBGene00001244 Length:274 Species:Caenorhabditis elegans


Alignment Length:251 Identity:65/251 - (25%)
Similarity:114/251 - (45%) Gaps:37/251 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 VYLLFVLKLGRKLMDKHEALQLRGVLKFYNIGQVLFN---SVIFVWGIHLLFVQKPYNLSCMQVL 91
            |.::|.||   .:|...:...|.|.|..:|.|..:|:   |:...:|:...|..:.:..|.:.:.
 Worm    41 VVVIFGLK---AVMTNRKPFDLTGPLNLWNAGLAIFSTLGSLATTFGLLHEFFSRGFFESYIHIG 102

  Fly    92 PQDHELKSTERTLSYMYHLNKVLDLMDTIFFVLRKKQRQITFLHVFHHV------FMVFTSHMLI 150
            ...:.|..   ..::::.|:||.:..||:|.:||||  .:.|||.:|||      ||.|.:::  
 Worm   103 DFYNGLSG---MFTWLFVLSKVAEFGDTLFIILRKK--PLMFLHWYHHVLTMNYAFMSFEANL-- 160

  Fly   151 RFYGFGGHVFLICMFNVLVHIVMYGYYYASSQSQNVQESLWWKKYLTLGQLVQFLL---MFLHCM 212
               ||.   ..|...|..||.:|||||..  :|..|:...|..|.:|..|::||::   :..|..
 Worm   161 ---GFN---TWITWMNFSVHSIMYGYYML--RSFGVKVPAWIAKNITTMQILQFVITHFILFHVG 217

  Fly   213 Y-TYFQPNCSASRGVIYVISSASAFMFLMFTKFYIKTYIR------PKEVKSKGKV 261
            | .....:..::.|..:..........::|..||.::||:      ..|.|::.|:
 Worm   218 YLAVTGQSVDSTPGYYWFCLLMEISYVVLFGNFYYQSYIKGGGKKFNAEKKTEKKI 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16904NP_649957.1 ELO 16..257 CDD:460083 63/245 (26%)
elo-6NP_500797.1 ELO 33..262 CDD:460083 62/238 (26%)

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