DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG16904 and elovl3

DIOPT Version :10

Sequence 1:NP_649957.1 Gene:CG16904 / 41212 FlyBaseID:FBgn0037763 Length:262 Species:Drosophila melanogaster
Sequence 2:XP_002935809.1 Gene:elovl3 / 100497108 XenbaseID:XB-GENE-977704 Length:270 Species:Xenopus tropicalis


Alignment Length:239 Identity:58/239 - (24%)
Similarity:110/239 - (46%) Gaps:42/239 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 GRKLMDKHEALQLRGVLKFYNIGQVLFNSVIFV---WGIHLLFVQKPYNLS-CMQVLPQDHELKS 99
            |:::|.:....:||..|..::....:|:.:..|   |.:..:.:...:..| |      |....|
 Frog    53 GQRMMKERRRFELRRPLVLWSFTLAVFSIIGAVRTGWFMGNILITNGFKQSVC------DRAFYS 111

  Fly   100 --TERTLSYMYHLNKVLDLMDTIFFVLRKKQRQITFLHVFHHVFMVFTSHMLIRFYGF-----GG 157
              ..:..:|.:.|:||.:|.||:|.||||  :::.|||.:||:.:     :|..:|.:     ||
 Frog   112 GPVSKFWAYAFVLSKVPELGDTLFIVLRK--QKLIFLHWYHHITV-----LLYTWYTYKDTVAGG 169

  Fly   158 HVFLICMFNVLVHIVMYGYYYASSQSQNVQESLWWKKYLTLGQLVQFLLMFL--HCMYTYFQP-N 219
            ..|:  ..|..||..||.||...:....|....  ..::|..|::|.::..:  ..:|::.|. :
 Frog   170 GWFM--TMNYTVHAFMYSYYTLRAAGIRVPRPC--AMFITFTQILQMVMGIVVNALVYSWRQDGS 230

  Fly   220 C-SASRGVIYVISSASAFM----FLMFTKFYIKTYIRPKEVKSK 258
            | |.:..:.:     |..|    |::|..|:.|.|:: ..:|:|
 Frog   231 CLSTTENIFW-----SCLMYFSYFILFCSFFYKAYLK-YPIKNK 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16904NP_649957.1 ELO 16..257 CDD:460083 56/236 (24%)
elovl3XP_002935809.1 ELO 31..262 CDD:460083 56/230 (24%)

Return to query results.
Submit another query.