DRSC/TRiP Functional Genomics Resources

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Protein Alignment topi and Kr

DIOPT Version :10

Sequence 1:NP_649945.1 Gene:topi / 41199 FlyBaseID:FBgn0037751 Length:814 Species:Drosophila melanogaster
Sequence 2:NP_523867.1 Gene:Kr / 38012 FlyBaseID:FBgn0001325 Length:502 Species:Drosophila melanogaster


Alignment Length:109 Identity:22/109 - (20%)
Similarity:36/109 - (33%) Gaps:33/109 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SFNQHHQEKHTSKQPACNCVAEAIRRV------------TALRKLATQQDGDFTMVQNNEVKWAK 78
            |....|:.:|.:.:.|.....:.:|.|            :|.|.........||          :
  Fly   125 SREHQHERRHRNHRTASRTDEDDVRTVCCSFMEYLDCSESAARNTCGHDTASFT----------R 179

  Fly    79 LFMEFIIGT---AYCQ----STKC---QAHSDDMIW-YVHQAKL 111
            .|::.:..|   .||:    |.||   .:.|....| .:|.|.|
  Fly   180 GFLDKMSSTLIKMYCEDYYKSNKCPSMYSSSSSSSWSQLHSATL 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
topiNP_649945.1 C2H2 Zn finger 230..250 CDD:275370
C2H2 Zn finger 277..297 CDD:275370
C2H2 Zn finger 431..453 CDD:275368
COG5048 <450..647 CDD:227381
C2H2 Zn finger 469..490 CDD:275368
C2H2 Zn finger 513..564 CDD:275368
C2H2 Zn finger 541..561 CDD:275368
C2H2 Zn finger 572..592 CDD:275368
C2H2 Zn finger 600..620 CDD:275368
zf-H2C2_2 612..637 CDD:463886
C2H2 Zn finger 628..646 CDD:275368
KrNP_523867.1 SFP1 <212..324 CDD:227516 4/12 (33%)
C2H2 Zn finger 224..244 CDD:275368 22/109 (20%)
zf-H2C2_2 237..261 CDD:463886
C2H2 Zn finger 252..272 CDD:275368
zf-H2C2_2 264..289 CDD:463886
C2H2 Zn finger 280..300 CDD:275368
C2H2 Zn finger 308..328 CDD:275368
zf-H2C2_2 321..345 CDD:463886
C2H2 Zn finger 336..352 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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