DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment topi and ZNF454

DIOPT Version :9

Sequence 1:NP_649945.1 Gene:topi / 41199 FlyBaseID:FBgn0037751 Length:814 Species:Drosophila melanogaster
Sequence 2:NP_001171560.1 Gene:ZNF454 / 285676 HGNCID:21200 Length:522 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
topiNP_649945.1 C2H2 Zn finger 230..250 CDD:275368
C2H2 Zn finger 277..297 CDD:275368
C2H2 Zn finger 431..453 CDD:275368
COG5048 <450..647 CDD:227381
C2H2 Zn finger 469..490 CDD:275368
zf-C2H2 511..533 CDD:278523
C2H2 Zn finger 513..564 CDD:275368
C2H2 Zn finger 541..561 CDD:275368
zf-H2C2_2 555..581 CDD:290200
C2H2 Zn finger 572..592 CDD:275368
zf-H2C2_2 585..609 CDD:290200
zf-C2H2 598..620 CDD:278523
C2H2 Zn finger 600..620 CDD:275368
zf-H2C2_2 612..637 CDD:290200
C2H2 Zn finger 628..646 CDD:275368
ZNF454NP_001171560.1 KRAB 14..73 CDD:214630
KRAB 14..53 CDD:279668
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 147..170
zf-C2H2 178..200 CDD:278523
C2H2 Zn finger 180..200 CDD:275368
COG5048 186..522 CDD:227381
C2H2 Zn finger 218..238 CDD:275368
zf-H2C2_2 230..254 CDD:290200
C2H2 Zn finger 246..266 CDD:275368
zf-H2C2_2 258..283 CDD:290200
C2H2 Zn finger 274..294 CDD:275368
zf-H2C2_2 286..311 CDD:290200
C2H2 Zn finger 302..322 CDD:275368
zf-H2C2_2 314..339 CDD:290200
C2H2 Zn finger 330..350 CDD:275368
zf-H2C2_2 342..365 CDD:290200
C2H2 Zn finger 358..378 CDD:275368
zf-H2C2_2 370..393 CDD:290200
C2H2 Zn finger 386..406 CDD:275368
zf-H2C2_2 398..421 CDD:290200
C2H2 Zn finger 414..434 CDD:275368
zf-H2C2_2 426..450 CDD:290200
C2H2 Zn finger 442..462 CDD:275368
zf-H2C2_2 454..479 CDD:290200
C2H2 Zn finger 470..490 CDD:275368
zf-H2C2_2 482..507 CDD:290200
C2H2 Zn finger 498..518 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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