DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snap24 and snap23.2

DIOPT Version :10

Sequence 1:NP_524298.1 Gene:Snap24 / 41193 FlyBaseID:FBgn0266720 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_001032194.2 Gene:snap23.2 / 641321 ZFINID:ZDB-GENE-051030-75 Length:200 Species:Danio rerio


Alignment Length:197 Identity:56/197 - (28%)
Similarity:101/197 - (51%) Gaps:7/197 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 QELQFKSGQVADESLESTRRMLALMDESKEAGIRTLVALDDQGEQLDRIEEGMDRINADMREAEK 78
            :::..|:..|.:.|||||||:..:.:|....|..|:..||:|||:|..::..:..||.|:::|:.
Zfish     4 EQITIKANHVTNASLESTRRIAQMTEECLNMGAETMTMLDEQGEKLHNVKRELGHINQDIKQAQA 68

  Fly    79 NLSGMEKCC--GIC--VLPWKKVNIKDDGESAWKANDDGKIVASQPQRVIDERERGGMGAPPQSG 139
            ||:.:....  ..|  :.|.|:   :...:.|.|..:...:.:..|..|...:........|...
Zfish    69 NLNKLSSWTWKSFCSRLKPTKR---ESTSKQASKPKERQNVASCHPAAVQKGQAVSAESTAPSGP 130

  Fly   140 YVARITNDAREDEMDENLGQVNSMLGNLRNMALDMGSELENQNKQVDRINAKGDANNIRMDGVNK 204
            |:.|||||.||:||::||.::...:..:|:..|::.::|:.|||.:..|....|..|..:...||
Zfish   131 YITRITNDERENEMEDNLTKLGHCIKIIRDQTLEINNKLDEQNKTIQDIQNDVDQANDDVATANK 195

  Fly   205 RA 206
            :|
Zfish   196 QA 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snap24NP_524298.1 SNARE_SNAP25N_23N 18..82 CDD:277242 24/63 (38%)
SNAP-25 93..149 CDD:459955 13/55 (24%)
SNARE_SNAP25C 150..208 CDD:277238 17/57 (30%)
snap23.2NP_001032194.2 SNARE 9..72 CDD:473982 24/62 (39%)
SNAP-25 82..140 CDD:459955 14/60 (23%)
SNARE_Qc 142..199 CDD:277194 16/56 (29%)

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