DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snap24 and snap23

DIOPT Version :10

Sequence 1:NP_524298.1 Gene:Snap24 / 41193 FlyBaseID:FBgn0266720 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_001107340.1 Gene:snap23 / 100135161 XenbaseID:XB-GENE-942565 Length:205 Species:Xenopus tropicalis


Alignment Length:204 Identity:111/204 - (54%)
Similarity:144/204 - (70%) Gaps:11/204 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 QELQFKSGQVADESLESTRRMLALMDESKEAGIRTLVALDDQGEQLDRIEEGMDRINADMREAEK 78
            :|:|.|:.||.|:|||||||||.|..||::.||:|:..||:|||||:|||||||:||.|||||||
 Frog     7 EEIQLKANQVTDDSLESTRRMLNLALESQDTGIKTITMLDEQGEQLNRIEEGMDQINKDMREAEK 71

  Fly    79 NLSGMEKCCGICVLPWKKVNIKDDGES---AW--KANDDGKIVASQPQRVIDERERGGMGAPPQS 138
            ||:.:.||||:||.|.|:....:.||:   .|  |.||...:::.||.:.     .|..|...||
 Frog    72 NLTELNKCCGLCVCPGKRPKDFESGENYKKTWGSKDNDSENVISKQPHQT-----NGQQGGVAQS 131

  Fly   139 G-YVARITNDAREDEMDENLGQVNSMLGNLRNMALDMGSELENQNKQVDRINAKGDANNIRMDGV 202
            | |:.|||.|.|||||||||.||.|:||||:|||:|||:|||:.|:|:||||.|.:.|..|:|..
 Frog   132 GPYIKRITGDDREDEMDENLTQVGSILGNLKNMAIDMGNELESHNQQIDRINEKAETNKTRIDEA 196

  Fly   203 NKRANNLLK 211
            |.||..|::
 Frog   197 NTRAKKLIE 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snap24NP_524298.1 SNARE_SNAP25N_23N 18..82 CDD:277242 44/63 (70%)
SNAP-25 93..149 CDD:459955 20/61 (33%)
SNARE_SNAP25C 150..208 CDD:277238 37/57 (65%)
snap23NP_001107340.1 SNARE 9..75 CDD:473982 45/65 (69%)
SNAP-25 86..143 CDD:459955 20/61 (33%)
SNARE_SNAP23C 144..202 CDD:277237 37/57 (65%)

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