DRSC/TRiP Functional Genomics Resources

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Protein Alignment: side-VII and Skint3

Sequence 1:NP_001262432.1 Gene:side-VII FlyBaseID:FBgn0037736 Length:939 Species:Drosophila melanogaster
Sequence 2:NP_001095944.1 Gene:Skint3 MGIID:3045331 Length:458 Species:Mus musculus

Alignment Length:209 Identity:44/210 (21%)
Similarity:81/210 (39%) Gaps:60/210 (29%)


  Fly     3 LLLLFMLALQLIESSIGSKDVPIHQIESIVGENIYLPCNVTTYDGDEPVLVLWYRDDKGTPIYSI 67
            |.:|.||.|...:.:|...:.|   :.:.:|..:.|.|.::.....:.:.:.|:|:....|:|. 
Mouse    15 LCVLQMLVLSSEQFTITGLERP---VLAPLGGILELSCQLSPPQNAQQMEIRWFRNRYTEPVYL- 75

  Fly    68 DIRAG-------VSKAPKRWSDDSVFGDRAYFI-FDKEPGKLSIQ--NTQASDSGTYRC------ 116
             .|.|       :||          :.:|...: .|...||::::  .....|.|:|.|      
Mouse    76 -YRNGKDLHGETISK----------YVERTELLKHDIGKGKVTLRVFKVTVDDDGSYHCVFKDGI 129

  Fly   117 ----RVDFLKAQTINSRIRLNVISPPKQVIIRDSSNVERSTVVGPYSEGDIVSLKCQVIGGYPTP 177
                .:..:|....:|.|:: ::.||         |::.            |.|:|...|.:|.|
Mouse   130 FYEEHITEVKVTATSSDIKI-IMHPP---------NIKG------------VMLECHSRGWFPQP 172

  Fly   178 TISWYRD--GIEIP 189
            .:.| ||  |..||
Mouse   173 HMEW-RDSNGQVIP 185

Known Domains:


GeneSequenceDomainRegion External IDIdentity
side-VIINP_001262432.1 IG_like 32..134 CDD:214653 22/122 (18%)
V-set 32..134 CDD:284989 22/122 (18%)
IGc2 160..>214 CDD:197706 12/33 (36%)
Ig 262..328 CDD:299845
IG_like 264..323 CDD:214653
IGc2 360..425 CDD:197706
Ig_3 456..519 CDD:290638
FN3 538..620 CDD:238020
FAM176 643..741 CDD:291517
Skint3NP_001095944.1 IG_like 35..140 CDD:214653 21/120 (18%)
Ig_MOG_like 42..141 CDD:143190 20/111 (18%)
Ig 159..221 CDD:299845 12/29 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 0.750 Consistency score
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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