DRSC/TRiP Functional Genomics Resources

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Protein Alignment FoxP and fd96Ca

DIOPT Version :10

Sequence 1:NP_001247011.1 Gene:FoxP / 41182 FlyBaseID:FBgn0262477 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_524495.1 Gene:fd96Ca / 43010 FlyBaseID:FBgn0004897 Length:372 Species:Drosophila melanogaster


Alignment Length:221 Identity:57/221 - (25%)
Similarity:94/221 - (42%) Gaps:70/221 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   318 NREFYKNADVRPPFTYASLIRQAIIDSPDKQLTLNEIYNWFQNTFCYFRRNAATWKNAIRTNLSL 382
            :||.|  .:.:||::|.||...||..||:|.|.|::||.:..:.|.|:|:|...|:|::|.|||.
  Fly     5 SRESY--GEQKPPYSYISLTAMAIWSSPEKMLPLSDIYKFITDRFPYYRKNTQRWQNSLRHNLSF 67

  Fly   383 HKCFVRY-----EDDFGSFW--------MVDDNEFVKRRHLSRGRPRKYEPSSSPNSCQSGNGVP 434
            :.||::.     ....|::|        |.::...::||       ::::               
  Fly    68 NDCFIKVPRRPDRPGKGAYWALHPQAFDMFENGSLLRRR-------KRFK--------------- 110

  Fly   435 TDKNPCDNCTQHCTSLP----------PGAD----NPLDSNN----------------PNDLGRI 469
            ..||..|...:..|:|.          .|..    :|||.||                ||.||..
  Fly   111 LHKNDKDLLNEELTALANLNRFFFTTRNGGSAAHMSPLDMNNAAAMRLDPLPRSTAHMPNSLGPG 175

  Fly   470 GCLPYCGSDGLSKASKDYSNM-DSGM 494
            ..||:.....:|.|  |::|: |.|:
  Fly   176 VPLPHVMPASMSGA--DHTNLADMGL 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxPNP_001247011.1 FOXP-CC 157..224 CDD:465036
FH_FOX 327..408 CDD:469596 29/93 (31%)
fd96CaNP_524495.1 FH_FOX 1..110 CDD:469596 34/113 (30%)
Blue background indicates that the domain is not in the aligned region.

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