DRSC/TRiP Functional Genomics Resources

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Protein Alignment FoxP and Foxp3

DIOPT Version :10

Sequence 1:NP_001247011.1 Gene:FoxP / 41182 FlyBaseID:FBgn0262477 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001101720.1 Gene:Foxp3 / 317382 RGDID:1562112 Length:429 Species:Rattus norvegicus


Alignment Length:336 Identity:113/336 - (33%)
Similarity:168/336 - (50%) Gaps:73/336 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 EFISEQEKLMFSDAERFLRS----KDNEVCNNDFSYMHDEFAMRKYYHPLFAHGICRWPGCEMDL 172
            |::|.:..|:.:    |.||    ||:.:           .|..:..:||.|:|:|:|||||...
  Rat   159 EWVSREPALLCT----FPRSGTPRKDSNL-----------LAAPQGSYPLLANGVCKWPGCEKAF 208

  Fly   173 EDITSFVKHLNTEHGLDDRSTAQARVQMQVVSQLESHLQKERDRLQAMMHHLYLSKQLLSPTKID 237
            |:...|:||...:|.||::..||..:|.:||..||..|:.|:::|.||..||.....|.....:.
  Rat   209 EEPGEFLKHCQADHLLDEKGKAQCLLQREVVQSLEQQLELEKEKLGAMQAHLAGKMALTKAPPVA 273

  Fly   238 RKDVPGREGKFCRSPLTVNSIGRPIRQTNSPSPLNLPMVNSTNLCSIKKR---NHDKNTFSINGG 299
            ..|    :...|.  :..::.|..:...:||...      |.:|.::::.   :|..:||     
  Rat   274 SVD----KSSCCL--VATSTQGSVLPAWSSPREA------SDSLFAVRRHLWGSHGNSTF----- 321

  Fly   300 LPYMLERAGLDVQQEIHRNREFYKNADVRPPFTYASLIRQAIIDSPDKQLTLNEIYNWFQNTFCY 364
                         .|...|.:::|..::|||||||:|||.||:::|::|.||||||:||...|.|
  Rat   322 -------------PEFFHNMDYFKYHNMRPPFTYATLIRWAILEAPERQRTLNEIYHWFTRMFAY 373

  Fly   365 FRRNAATWKNAIRTNLSLHKCFVRYEDDFGSFWMVDDNEFVKRRHLSRGRPRKYEPSSSPNSCQS 429
            ||.:.||||||||.||||||||||.|.:.|:.|.||:.||.|:|            |..|:.|  
  Rat   374 FRNHPATWKNAIRHNLSLHKCFVRVESEKGAVWTVDEFEFRKKR------------SQRPSKC-- 424

  Fly   430 GNGVPTDKNPC 440
                   .|||
  Rat   425 -------SNPC 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxPNP_001247011.1 FOXP-CC 157..224 CDD:465036 28/66 (42%)
FH_FOX 327..408 CDD:469596 52/80 (65%)
Foxp3NP_001101720.1 PHA03247 <1..137 CDD:223021
FOXP-CC 193..260 CDD:465036 28/66 (42%)
FH_FOXP3 337..417 CDD:410840 52/79 (66%)
Blue background indicates that the domain is not in the aligned region.

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