DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FoxP and fkh-8

DIOPT Version :10

Sequence 1:NP_001247011.1 Gene:FoxP / 41182 FlyBaseID:FBgn0262477 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001254107.1 Gene:fkh-8 / 174026 WormBaseID:WBGene00001440 Length:328 Species:Caenorhabditis elegans


Alignment Length:183 Identity:52/183 - (28%)
Similarity:82/183 - (44%) Gaps:58/183 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   278 STNLCSIKKRNHDKNTFSINGGLPYMLERAGLDVQQEIH-------------------------- 316
            |::||.                |.:::.:.||:..|||.                          
 Worm     5 SSSLCQ----------------LNWLIAKGGLNTVQEIEVPENPNIVGSVNVSPLVLSPTVPAET 53

  Fly   317 ----------RNREFYKNADVRPPFTYASLIRQAIIDSPDKQLTLNEIYNWFQNTFCYFRRNA-A 370
                      :.|..:..|| :||::|:.|||.||.|:|||:.||.|||::..:.|.::|.|. :
 Worm    54 SKPVAPAHEGKRRRIFDGAD-KPPYSYSQLIRLAIEDTPDKKCTLAEIYSFIAHNFQFYRENRNS 117

  Fly   371 TWKNAIRTNLSLHKCFVRYEDDFG---SFWMVDDNEFVKRRHLSRGRPRKYEP 420
            :|||:||.||||:|.|.|.|...|   .:|:..|.. .|:..:.:|.|.:..|
 Worm   118 SWKNSIRHNLSLNKQFSRIEKTDGDRRGWWVCVDPP-AKKPRILKGSPVRVNP 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxPNP_001247011.1 FOXP-CC 157..224 CDD:465036
FH_FOX 327..408 CDD:469596 37/84 (44%)
fkh-8NP_001254107.1 COG5025 30..>217 CDD:227358 43/142 (30%)
FH 74..156 CDD:214627 36/82 (44%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.