DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-IIa and LManIII

DIOPT Version :10

Sequence 1:NP_001262413.1 Gene:alpha-Man-IIa / 41126 FlyBaseID:FBgn0011740 Length:1109 Species:Drosophila melanogaster
Sequence 2:NP_609250.2 Gene:LManIII / 34203 FlyBaseID:FBgn0032066 Length:1003 Species:Drosophila melanogaster


Alignment Length:923 Identity:232/923 - (25%)
Similarity:406/923 - (43%) Gaps:173/923 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 YDPLKYNAHHKLKVFVVPHSHNDPGWIQTFEEYY---QHDTKH-----ILSNALRHLHDNPEMKF 190
            |:.......:.:.:.:|||||:|.||::|.::||   :|:.:|     |....:..|..:...:|
  Fly    26 YESCPETKSNMINIHLVPHSHDDLGWLKTVDQYYYGNKHNIQHAGVQYIFDTVVAELSKDSRRRF 90

  Fly   191 IWAEISYFARFYHDLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEGQTWLKQ 255
            |..|..:||:::.|..|.||..:|::|..|:|||..|.|.|.|||..::::|:.|...|..:|..
  Fly    91 IQVETGFFAKWWEDQSETKKKLVKTLVNEGRLEFTGGAWSMNDEAAVNYQSVIDQFAVGLKFLND 155

  Fly   256 FMNV--TPTASWAIDPFGHSPTMPYILQKSGFKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNK 318
            ...|  .|...|.||.||||.....:..:..|......|...:.|.:......||.:| ...:..
  Fly   156 NFGVCGRPRVGWQIDAFGHSREQASMFAQMAFDGQFFARMDQNDKNKRVDNLGLEMVW-DASETL 219

  Fly   319 GDTALFTHMM-------PFYSYDIPHTCGPDPKVCCQFDFKRMGSFGLSCPWKVPPRTISDQNVA 376
            .:...||.|:       |.:.:|  ..|..||.:    |.|..                 |.||.
  Fly   220 EEMDFFTGMLYNHYSAPPGFCFD--SLCQDDPII----DGKSY-----------------DNNVK 261

  Fly   377 ARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHIN----SQAHFNVQ 437
            :|.|..::.....|..||:|.:::|:||||:: :|...:.:  |.::|.:::|    |.:.:|: 
  Fly   262 SRVDDFLNYASNLAGYYRSNHIMVPMGDDFQY-ENAYMNYK--NMDKLIKYVNERQASGSKYNI- 322

  Fly   438 AQFGTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYVRA 502
             .:.|...|.:::|::.::    ||..:.||..::..:.::|:|::||||..||.:|...|.::.
  Fly   323 -FYSTAGCYLNSLHKSLQS----FPNKTQDFLPHSHEAKSFWTGFFTSRPTQKRFERDGNHILQV 382

  Fly   503 AEMLSAWHSWDGMARIEER---LEQARRELSLFQHHDGITGTAKTHVVVDYEQRMQEALKACQMV 564
            |:.||......|    ||:   |:..|:.:::.||||.||||.|..|..||::.:.:|:......
  Fly   383 AKQLSVLADLSG----EEQHKDLDYLRQIMAVMQHHDAITGTEKQEVSNDYDRLLYDAILGGANT 443

  Fly   565 MQQSVYRLLTKP-----SIYSPDFSFSYFTLDDSRWPGSGVEDSRTTIILGEDILPSKHVVMHNT 624
            .:.::..|..:|     |....:.|...||.:::                 :|.:    |.::|.
  Fly   444 ARDALRVLTNQPNGEFQSCLKLNISECAFTKENA-----------------DDFM----VTLYNP 487

  Fly   625 LPHWREQLVDFYVSSPFVSVTDLANNPVEAQVSPVWSWHHDTLTKTIHPQGSTTKYRIIFKARVP 689
            |.|...|.|...|......|||.....|.:::.|| .|.    ..::..:.:.|::.::|||.|.
  Fly   488 LAHTSTQYVRVPVKEDSYQVTDEKGGLVASELVPV-PWE----VLSLEFRNNDTQHELVFKASVN 547

  Fly   690 PMGLATYVLTISDSKPE-----HTSYASNLLLRKNPTSLP-----LGQYPEDVKFGDPRE----- 739
            .  :|||.:...|...|     :|....::...::...:|     :.....|::..|.:|     
  Fly   548 K--IATYFIKKIDKTTEVDITVNTQTEQSVNEEESNVKVPKRFKKVHSLKTDLETLDDQETIVQN 610

  Fly   740 --ISLRVGNGPTLAFSEQGLLKSIQLTQDSPHVPVHFKFLKYGVRSHGDRSGAYLFLPNGPASPV 802
              |.|.:.|       ..|.||::::...|..:...|...|..      ||..|:|..:.....|
  Fly   611 SLIKLVIDN-------NTGRLKTVEMNGVSEDIDQTFGMYKTA------RSCHYIFRQDADLELV 662

  Fly   803 ELGQPVVLVTKGKLESSVSVGLPSV--VHQTIMRGGAPEIR-----NLVD----IGSLD-----N 851
            |          ...:.:|..| .||  |||.:....:..||     |.|:    :|.:.     .
  Fly   663 E----------DAFDFTVYDG-ESVKEVHQHVNEWISQVIRIYEGVNRVEFEWLVGPVPIDDELG 716

  Fly   852 TEIVMRLETHIDSGDIFYTDLNGLQFIKRRR---------LDKLPLQANYYPIPSGMFIEDANTR 907
            .|||...::.|.||.:||||.||.:.::|.:         |.:.|:..||||:.|.|.::|::.|
  Fly   717 KEIVTIFKSGISSGGVFYTDSNGREMMRREKDKREDFSPDLSEQPVSGNYYPVTSRMALQDSSKR 781

  Fly   908 LTLLTGQPLGGSSLASGELEIMQDRR-LASD--------DERGLGQGVLDNKPVLHIYRLVLE-- 961
            :.||..:..||:||..|.||:|..|| :.:|        :|:..|:|:: .:..|.:|...:|  
  Fly   782 MVLLNDRSQGGASLEDGRLEMMLHRRHIFADGSGAAEAINEQQFGKGLI-ARGKLFLYLNAIEDG 845

  Fly   962 -KVNNCVRPSELH 973
             ..:..|...|:|
  Fly   846 ATASERVAEKEIH 858

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IIaNP_001262413.1 PLN02701 105..990 CDD:178304 232/923 (25%)
Glyc_hyd_38C_2 1020..1108 CDD:408054
LManIIINP_609250.2 PLN02701 20..820 CDD:178304 223/882 (25%)
GH38N_AMII_LAM_like 37..311 CDD:212121 82/300 (27%)
Blue background indicates that the domain is not in the aligned region.

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