DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-IIa and aman-1

DIOPT Version :10

Sequence 1:NP_001262413.1 Gene:alpha-Man-IIa / 41126 FlyBaseID:FBgn0011740 Length:1109 Species:Drosophila melanogaster
Sequence 2:NP_508811.1 Gene:aman-1 / 180749 WormBaseID:WBGene00018877 Length:955 Species:Caenorhabditis elegans


Alignment Length:955 Identity:262/955 - (27%)
Similarity:396/955 - (41%) Gaps:232/955 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 WN----IKYDPLKYNAHHKLKVFVVPHSHNDPGWIQTFEEYY--------QHDTKHILSNALRHL 182
            ||    :..||....||      ::||:|:|.|||:|.::|:        ....::|.:..:..|
 Worm    23 WNTCHKVDQDPNVITAH------LIPHTHDDLGWIKTVDQYFWGAKPELVPVGVQYIYNTVIDEL 81

  Fly   183 HDNPEMKFIWAEISYFARFYHDLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLT 247
            ..||:.:|.:||..:..|:|....:..:.|::.:|||||:|.:.||||..|||.||:.:::.|:|
 Worm    82 LKNPDRRFSFAETGFLWRWYTSNSDFDRHQLQKLVKNGQIEIIGGGWVQNDEATSHYVDIIDQMT 146

  Fly   248 EGQTWLKQFMNV--TPTASWAIDPFGHSPTMPYILQKSGFKNMLIQRTHYSVKKELAQQRQLEFL 310
            .|...|:|....  .|...|.|||||||..|..|.::.|:.::...|.||..|:...:.:.|||:
 Worm   147 LGLQRLEQIFGECGKPVTGWQIDPFGHSREMANIYREMGYSSVYFARIHYLEKQIRLKNKTLEFM 211

  Fly   311 WR---QIWDNKGDTALFTHMMPFYSYDIPH------TCGPDPKVCCQFDFKRMGSFGLSCPWKVP 366
            |.   .|.|||    |||......:|..|.      .||.||                    .:.
 Worm   212 WNTSDDITDNK----LFTGAFFNDNYGPPEGFCWDSLCGDDP--------------------IMD 252

  Fly   367 PRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQ 431
            ...|...||..:.|..||..|.:|....||.:::.:|.||::.....|   .||.::|.:::|:.
 Worm   253 NLNIEGYNVKEKVDAFVDHVKNQAAHQSTNQVMLLMGSDFQYTNANSW---YVNLDKLIKYVNAD 314

  Fly   432 AHFNVQAQFGTLQEYFDAVHQAERAGQAEFPTLS---GDFFTYADRSDNYWSGYYTSRPYHKRMD 493
            ....|:..:.|...|..||       ||:.||||   .|||.||....:||:||:||||..|.|.
 Worm   315 TSKKVRVIYSTPACYTKAV-------QAKTPTLSVKHDDFFPYASGRHSYWTGYFTSRPAFKGMI 372

  Fly   494 RVLMHYVRAAEMLSAWHSWDGMARI----EERLEQARRELSLFQHHDGITGTAKTHVVVDYEQRM 554
            |      :|:.||......|.:|.:    :..:|..|...:|.||||.:|||||.:|..|||:::
 Worm   373 R------QASCMLQLAKQLDVIANLGPEDDSDIEILREASALVQHHDAVTGTAKENVTRDYEKQL 431

  Fly   555 QEALKACQMVMQQSVYRL------------------LTKPSIYSPDFSFSYFTLDDSRWPGS-GV 600
            .:.:...::|:...:.::                  :.||...|.:||...|..:...:.|: .:
 Worm   432 AKGVSEVEVVINDFMKKMNPDGLDPKLVLCPLINETICKPINGSSEFSVVIFNSNGRYFNGTIRI 496

  Fly   601 EDSRTTIILGEDILPSKHVVMHNTLPHWREQLVDFYVSSPFVSVTDLANNPVEAQVSPVWSWHHD 665
            ..|:.|.:|                                   .|...|.:|:|:  |.::..|
 Worm   497 PYSQKTAVL-----------------------------------RDAHKNVLESQI--VETFQID 524

  Fly   666 TLTKTIHPQGSTTKYRIIFKARVPPMGLATYVLTISDSKPEHTSYASNLLLRKNPTSLPLGQYPE 730
            .|..|     ....|.|....||||:|..| |.....||||...:.:    ||            
 Worm   525 QLKDT-----DRLPYEIHVFVRVPPLGYTT-VFVEKGSKPERVHFNN----RK------------ 567

  Fly   731 DVKFGDPREISLRVGNGPTLA-FSEQGLLKSIQLTQDSPHVPVHFKFLKY-GVRSHGDR-SGAYL 792
              ||....||.    |...:| |..||.|..|..........:..:|..| |:.|..|: ||||:
 Worm   568 --KFNTNVEIQ----NEYLIAGFDSQGYLSYITEKATKKKRSIRQEFFYYEGIDSKDDQPSGAYI 626

  Fly   793 FLPNGPASPVELGQPVVLVTK-------GKLESSVSVGLPSVVHQTIMRGGAPEIRNLVD----I 846
            |.|       :..||:.|.:|       |.:.:.|...:...|.|.|.   .|..:|.::    :
 Worm   627 FRP-------KTQQPIALTSKLALEVVPGAIINEVRQKVSPFVSQQIR---LPRGKNYIEFEWIV 681

  Fly   847 GSLD-------NTEIVMRLETHIDSGDIFYTDLNGLQFIKR--------RRLDKLPLQANYYPIP 896
            |.:.       ..|.|.|..|.:.|.:..:||.||.|.::|        ...|..|:..|||||.
 Worm   682 GPIPKETKNPITKEFVTRYTTEVHSKNQSFTDSNGRQAMERFFDGATSFEYSDTEPIAGNYYPIT 746

  Fly   897 SGMFIEDANTRLTLLTGQPLGGSSLAS-GELEIMQDRRLASDDERGLGQGVLDNKPVLHIYRLVL 960
            |..:|:|.|.:.:::|.:..|  .:|| |.:|||..||...||..|: :..||            
 Worm   747 SFGYIKDENAQFSVITDRAQG--MVASDGVVEIMLHRRCFYDDHFGV-EEALD------------ 796

  Fly   961 EKVNNCVRPSELHPAGYLTSAAH-------KASQSLLDPL--DKF 996
                   .|.: ..||.:....|       |||.|.|.||  |.|
 Worm   797 -------EPGK-DGAGLVAMGKHIVLFTDVKASTSQLRPLAIDNF 833

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IIaNP_001262413.1 PLN02701 105..990 CDD:178304 257/945 (27%)
Glyc_hyd_38C_2 1020..1108 CDD:408054
aman-1NP_508811.1 PLN02701 23..871 CDD:178304 262/955 (27%)
GH38N_AMII_LAM_like 36..313 CDD:212121 91/309 (29%)
Blue background indicates that the domain is not in the aligned region.

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