DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8379 and armh3

DIOPT Version :10

Sequence 1:NP_996185.1 Gene:CG8379 / 41060 FlyBaseID:FBgn0037638 Length:707 Species:Drosophila melanogaster
Sequence 2:XP_002940615.3 Gene:armh3 / 100488528 XenbaseID:XB-GENE-5897002 Length:689 Species:Xenopus tropicalis


Alignment Length:693 Identity:326/693 - (47%)
Similarity:467/693 - (67%) Gaps:33/693 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RSGSGSTKRPKEKVVYIYELLCRGEDPSSESPEFWNEFFLLQPNFEALENEIGKLNNEQLQLVKP 70
            |..|.|.|..|||||.:|:.:...|||:..:|.||.|.||::.|.|.||:::..|:.|:|..:|.
 Frog    12 RKSSASKKPLKEKVVLMYDEIFMKEDPTKSNPRFWEELFLMKVNIEYLESKLESLDGEELMKLKD 76

  Fly    71 NLNTLFQRCIEMLDTEDHPKRLCNSLHTLCSLFYGIFKKSNAEPTLNILNEIFGHEKMDEWLKLL 135
            |:|:|||.||:.|..| |..|:.|||.|||:|..|:.:|:......:|:|.:.|.:|.:..:|.|
 Frog    77 NINSLFQHCIQALKAE-HQIRVVNSLQTLCALIRGVHQKNKPTSGFDIINMLMGFDKAELRMKNL 140

  Fly   136 MQYCNRILLGDVPENARFMCLKLLQVLVTGTDNVNQNALFEHLMMHSMFDAFVRLLSDPTFRSQH 200
            |:..:.:|.||..|:.:.:|||||..|||.|||::||.:.|::|::|:|:|.:::||:|..|.||
 Frog   141 MESLDLLLCGDGSESLKSLCLKLLLCLVTVTDNISQNTILEYVMINSIFEAILQILSNPISRRQH 205

  Fly   201 GHDIVILLTILVNYRKHEATNPYVVQLSILADELALNGYGQMISQSLIDFCRQYIQSLNNVQSSS 265
            |:|.|:||.:||||||:|:.|||:|:|||:.||..|||.|.:|:::|.::.||| :.......:.
 Frog   206 GYDAVVLLALLVNYRKYESVNPYIVKLSIVDDENTLNGMGLVIARALFEYNRQY-RDKEEENQTG 269

  Fly   266 WFSSLSNIVGNMFVSDEGCERVQQIKANNGLLLALYEAVHLNRNFITTLAHTQAE--------SS 322
            :||:|:|:||:||::|.. |:: .::.|..:||||||||||||||||.||.:..|        |.
 Frog   270 FFSALTNMVGSMFIADAD-EKI-SVQTNEAILLALYEAVHLNRNFITVLAQSHPEMGLVTVPVSP 332

  Fly   323 APPSPSNTLSLAQPVPDLSNAPIIDITQYP-------TNLLVAVFQYCSIVMQDNKNESSIANLK 380
            .|.:|::.|....|..|     :|..|:.|       :|||:...:|.||||||.|:|..:.:.|
 Frog   333 VPTTPTSPLGTTPPSSD-----VISPTELPMDADVQTSNLLITFLKYSSIVMQDTKDEHRLNSGK 392

  Fly   381 LCFLILTCISEDQYANSMMHDSNLTFKVMLHRAQMRHRKLNVDRVGKSQPLAATLLDLLVEFIVS 445
            ||.:|||||:||||||:.:||.|:.|:|.|||..|||||...|:....:||...:|||:|||||:
 Frog   393 LCLIILTCIAEDQYANAFLHDDNMNFRVNLHRMPMRHRKKAADKNIPCRPLVCAVLDLMVEFIVT 457

  Fly   446 HLMKKFPMELYLLCIGVIHRILCYQKRCRVRLNYPWKELWSALIGLLRFLVNQEQTLVKKCNIFH 510
            |:||.|||:||..||.:||::|||||:|||||:|.|:|||||||.||:||::.|..|:.|.|||.
 Frog   458 HMMKDFPMDLYTRCIQIIHKVLCYQKKCRVRLHYTWRELWSALINLLKFLMSYETALLSKYNIFT 522

  Fly   511 LSLQVVNIFNLFITYGDTFLATTNSYDELYYELNREEKVFTEIHAMVLRYTTMPDCEYKDDVIKL 575
            |:|.|||:||:|||||||||.|.:||||||||:.|..::|..:::||||.:|... ::|:...|:
 Frog   523 LALMVVNLFNMFITYGDTFLPTPSSYDELYYEIIRMHQIFDNLYSMVLRLSTNAG-QWKEPASKV 586

  Fly   576 LNALVNILAIVKHFQNKIKEWLAEQGLSTPTEEQILDVVRKNYD-LTLKLQDSLDQYERYTETPL 639
            .::||||.||:.||..||:.:.|...:|..:|||:|:|||.||| |||||||.|||||||:|...
 Frog   587 THSLVNIRAIINHFNPKIESYAAVNHISQLSEEQVLEVVRSNYDTLTLKLQDGLDQYERYSEQHK 651

  Fly   640 HTNFFKLMVRDVVNDTRKHIYGYVKEAVSVIPDQEILLSSSMT 682
            ...|||.:.|.:..:.||::      |.:.: .|||||....|
 Frog   652 EAAFFKELARSISVNVRKNL------AFNTL-SQEILLKEFST 687

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8379NP_996185.1 ARMH3_C 429..657 CDD:462473 126/228 (55%)
armh3XP_002940615.3 ARMH3_C 441..669 CDD:462473 126/228 (55%)

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