DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir85a and CG11155

DIOPT Version :10

Sequence 1:NP_649833.1 Gene:Ir85a / 41052 FlyBaseID:FBgn0037630 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster


Alignment Length:758 Identity:135/758 - (17%)
Similarity:222/758 - (29%) Gaps:309/758 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 KVLFVYFEN----QTSHEHTGQILKEVTKCDI-SNQNTP------LEAVKDDGILMYMVMITTNI 103
            ||..:|.|:    ...|..|      .||.:: ..|.:|      |.|::...|  |.:::.||.
  Fly   174 KVAIIYEEDYGLFNLMHSST------ETKAEMYIRQASPDSYRQVLRAIRQKEI--YKIIVDTNP 230

  Fly   104 S-------QPLELSLIRKKSAAKHRSHVFLLVRDADTVSDAWMRASFRQFWKIWLLNIVILYWRD 161
            |       ..|:|.:      ..||.|......|.:|..                       ..|
  Fly   231 SHIKSFFRSILQLQM------NDHRYHYMFTTFDLETYD-----------------------LED 266

  Fly   162 GRLNAYRYNPFMDNYLIPVDNKP-----NEVPTLEQLFPKTI---PNMQRKPLRMCIYKDDVRAI 218
            .|.|:.....|.   |:.||:|.     |::..|:.....||   |.:|.:...|.   |.|.|.
  Fly   267 FRYNSVNITAFR---LVDVDSKRYLEVINQMQKLQHNGLDTINGSPYIQTESALMF---DSVYAF 325

  Fly   219 --------------------------FWRQGTILG-------TDGLLAA--YVAERLNATMM--- 245
                                      .|..|..|.       ||||...  :|..|.|...:   
  Fly   326 ANGLHFLNLDNHQNFYIKNLSCTSDQTWNDGISLYNQINAAITDGLTGTVQFVEGRRNIFKLDIL 390

  Fly   246 --------------------ITRPHSYNNHNLSSDICFLEVAKE---YV------DVAMNIRF-- 279
                                |:.|.::.:.|: ::|..:.:.:|   ||      ::..|:||  
  Fly   391 KLKQEKIQKVGYWHPDDGVNISDPTAFYDSNI-ANITLVVMTREERPYVMVKEDKNLTGNLRFEG 454

  Fly   280 --------------------LVPDTF--------------------RKQ----AESTVSHTRDDL 300
                                ||||..                    |:.    |..|:::.|:.:
  Fly   455 FCIDLLKAIATQVGFQYKIELVPDNMYGVYIPETNSWNGIVQELMERRADLAVASMTINYARESV 519

  Fly   301 C------------VIVPKAKTAPTFWNIFRSFGSL---VWALILVSVLVANVFCYILKSEVGRVP 350
            .            ::.....:.||  .:|.....|   :|..:|.:        |||      |.
  Fly   520 IDFTKPFMNLGIGILFKVPTSQPT--RLFSFMNPLAIEIWLYVLAA--------YIL------VS 568

  Fly   351 MQLFAGALTMPM-----------TQIPPNH--------------------------SIRLFLIFW 378
            ..||..|...|.           |.|..|.                          |.|:....|
  Fly   569 FALFVMARFSPYEWKNPHPCYKETDIVENQFSISNSFWFITGTFLRQGSGLNPKATSTRIVGGCW 633

  Fly   379 LYFGLLICSAFKGNLTSMMVFQPYLPDINQLGALARSHYHIIIRPRHVKHIQHFLTLGHKHESRI 443
            .:|.|:|.|::..||.:.:..:..:..|.....||..           ..|.:....|....:..
  Fly   634 FFFCLIIISSYTANLAAFLTVERMISPIESASDLAEQ-----------TEISYGTLEGGSTMTFF 687

  Fly   444 REQMLEVSDTQMYEMMRNNDIRFAYLEKYH--IARFQVNSRVHMHLGRPLFHLMNSCLVPFHAV- 505
            |:..:.:.. :|:..|.|.... .:::.|.  |.|....|..         .||.|.::.: || 
  Fly   688 RDSKIGIYQ-KMWRYMENRKTA-VFVKTYEDGIKRVMEGSYA---------FLMESTMLDY-AVQ 740

  Fly   506 ------------------YIVPYGSPYLGFLDSLIRSSHEFG-----FERYWDRIMNSAFIKSGV 547
                              ...|.|||:...:...|....|.|     ::::|         |:..
  Fly   741 RDCNLTQIGGLLDSKGYGIATPKGSPWRDKISLAILELQEKGIIQILYDKWW---------KNTG 796

  Fly   548 KVVNRRRGSGNDEPVVLKLQHFHAVFALWLVGIGMACIVLAWE 590
            .|.||...|...:...|.:::...||.:.|.|:.:|.:|..:|
  Fly   797 DVCNRDDKSKESKANALGVENIGGVFVVLLCGLALAVVVAIFE 839

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir85aNP_649833.1 None
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..413 CDD:380605 53/281 (19%)
PBP2_iGluR_Kainate 424..793 CDD:270432 67/416 (16%)
Lig_chan 554..828 CDD:459656 57/319 (18%)

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