DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir85a and Ir40a

DIOPT Version :10

Sequence 1:NP_649833.1 Gene:Ir85a / 41052 FlyBaseID:FBgn0037630 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster


Alignment Length:451 Identity:81/451 - (17%)
Similarity:134/451 - (29%) Gaps:169/451 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 LGTDGLLAAYVAERLNATMMITR-------PHSYNNHNLSSDICFLEVAKEYVDVAMNIRFLVPD 283
            |...|..|.:...|||..:.|.|       ||.......|..|.:..:|..|:            
  Fly   338 LADSGAFATHAPRRLNEALAIMRPFKQDIWPHLILTIIFSGPIFYGIIALPYI------------ 390

  Fly   284 TFRKQAESTVSHTRD------DLCVIVPK-AKTAPTFWNIFRSFGSLVWALILVSVLVANVFCYI 341
            ..|:.|.|.|.|..:      .|..|.|: .|..|.                  :||.|:     
  Fly   391 WRRRWANSDVEHLGELYIHMTYLKEITPRLLKLKPR------------------TVLSAH----- 432

  Fly   342 LKSEVGRVPMQLFAGALTMPMTQIPPNHSIRLFL------------------IFWLYFGLLICSA 388
                  ::|.|||...:..         ::||||                  ::|:....::...
  Fly   433 ------QMPHQLFQKCIWF---------TLRLFLKQSCNELHNGYRAKFLTIVYWIAATYVLADV 482

  Fly   389 FKGNLTSMMVFQPYLPDINQL----GALARSHYHIIIRPRHVKHIQHFLTLGHKHESRIREQMLE 449
            :...|||........|.||.|    .|:....|.:.:               .|..|.:  :|||
  Fly   483 YSAQLTSQFARPAREPPINTLQRLQAAMIHDGYRLYV---------------EKESSSL--EMLE 530

  Fly   450 VSD---TQMYEMMRNNDIR---------------------------------FAYLEKYHIARFQ 478
            ...   .|:|.:||...|.                                 |..:::|....||
  Fly   531 NGTELFRQLYALMRQQVINDPQGFFIDSVEAGIKLIAEGGEDKAVLGGRETLFFNVQQYGSNNFQ 595

  Fly   479 VNSRVHMHLGRPLFHLMNSCLVPFHAVYIVPYGSPYLGFLDSLIRSSHEFG---------FERYW 534
            ::.:::..                ::...|..|.|:||.|::::....|.|         :.:.:
  Fly   596 LSQKLYTR----------------YSAVAVQIGCPFLGSLNNVLMQLFESGILDKMTAAEYAKQY 644

  Fly   535 DRIMNSAFIKSGVKVVNRR---RGSGNDEPVV--LKLQHFHAVFALWLVGIGMACIVLAWE 590
            ..:..:...|..|:..|..   |....|..|:  |.|:.....|....||...|.::|..|
  Fly   645 QEVEATRIYKGSVQAKNSEAYSRTESYDSTVISPLNLRMLQGAFIALGVGSLAAGVILLLE 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir85aNP_649833.1 None
Ir40aNP_610140.4 Lig_chan-Glu_bd <265..336 CDD:463166
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:473866 14/64 (22%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:473866 28/173 (16%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.