DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir85a and Grin2d

DIOPT Version :10

Sequence 1:NP_649833.1 Gene:Ir85a / 41052 FlyBaseID:FBgn0037630 Length:605 Species:Drosophila melanogaster
Sequence 2:XP_063136781.1 Gene:Grin2d / 24412 RGDID:2740 Length:1356 Species:Rattus norvegicus


Alignment Length:576 Identity:104/576 - (18%)
Similarity:210/576 - (36%) Gaps:174/576 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 VFLLVRDAD-TVSDAWMRASFRQFWKIWLLNIVILYWRDGRLNAYRYNPFMDNYLIPVDNKPNEV 187
            |..|.||.. .|..:|.:.:.|..:.:|                .||..|:.    |||:..:  
  Rat   386 VISLTRDRTWEVVGSWEQQTLRLKYPLW----------------SRYGRFLQ----PVDDTQH-- 428

  Fly   188 PTLEQLFPKTIPNMQRKPLRMCIYKDDVRAIFWRQGTILGTDGLLAAYVAERLNATMMITRPHS- 251
                    .|:..::.:|..:....|.:      .||.          :.:.:.....:.|.|| 
  Rat   429 --------LTVATLEERPFVIVEPADPI------SGTC----------IRDSVPCRSQLNRTHSP 469

  Fly   252 -----------------------YNNHNLSSDICFLEVAK--EYVDVAMNIRFLVPDTFRKQAES 291
                                   .:....|.|:..:...|  :.:|...|  .::.:.|.::|:.
  Rat   470 PPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKKIDGVWN--GMIGEVFYQRADM 532

  Fly   292 -----TVSHTRDDLC-VIVPKAKTAPTFWNIFRSFGSL------------VWALILV---SVLVA 335
                 |::..|.::. ..||..:|..:.. :.||.|::            ||.::.|   :|:..
  Rat   533 AIGSLTINEERSEIVDFSVPFVETGISVM-VARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAV 596

  Fly   336 NVFCYILKSEVGRVPMQLFAG------------------AL----TMPMTQIPPNHSIRLFLIFW 378
            .||.:...|.|| ....|..|                  ||    ::|: :.|...:.::.::.|
  Rat   597 TVFIFEYLSPVG-YNRSLATGKRPGGSTFTIGKSIWLLWALVFNNSVPV-ENPRGTTSKIMVLVW 659

  Fly   379 LYFGLLICSAFKGNLTSMMVFQPYLPDINQLGALARSHYHIIIRPRHVKHIQHFLTLGH-KHESR 442
            .:|.::..:::..||.:.|:.:.|   ::.:..|:...:.   ||:.......|.|:.: ..|..
  Rat   660 AFFAVIFLASYTANLAAFMIQEEY---VDTVSGLSDRKFQ---RPQEQYPPLKFGTVPNGSTEKN 718

  Fly   443 IREQMLEVSDTQMYEMMRNNDIRFAYLEKYHIARFQVNSRVHMHLGRPLFHLMNSCLVPFHA--- 504
            ||..         |..|.      :|:.:|:..|.: .:...:..|:....:.::.::.:.|   
  Rat   719 IRSN---------YPDMH------SYMVRYNQPRVE-EALTQLKAGKLDAFIYDAAVLNYMARKD 767

  Fly   505 --VYIVPYGSPYL----GFLDSLIRSSHEFGFERYWDRIMNSAFIK----SGVKVVNRRRGSG-- 557
              ..:|..||..:    |:..:|.:.|.       |.|.::.|.::    ..::::.|...||  
  Rat   768 EGCKLVTIGSGKVFATTGYGIALHKGSR-------WKRPIDLALLQFLGDDEIEMLERLWLSGIC 825

  Fly   558 -NDEPVV----LKLQHFHAVFALWLVGIGMACIVLAWEHLTH---NYNLAVTKRRD 605
             ||:..|    |.:.:...||.:.||.:|::.:|.|||||.:   .:.|..|.|.|
  Rat   826 HNDKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWRLRHCLGPTHRMD 881

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