DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir85a and glr-8

DIOPT Version :10

Sequence 1:NP_649833.1 Gene:Ir85a / 41052 FlyBaseID:FBgn0037630 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_001368711.1 Gene:glr-8 / 180924 WormBaseID:WBGene00001619 Length:547 Species:Caenorhabditis elegans


Alignment Length:367 Identity:71/367 - (19%)
Similarity:138/367 - (37%) Gaps:78/367 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   278 RFLVPD-TFRKQAESTVSHTR------DDLCVIVPKAKTAPTFWNIFRSFGSLVWALILVSVLVA 335
            |.::.| |:..|.|.|....|      ||..:||    |.|..|.        ||.:....:|::
 Worm   154 RSVIADLTYPFQFEPTGIMIRSPEKYEDDTLLIV----TEPFSWE--------VWVITAAVILIS 206

  Fly   336 NVFCYILKSEVGRV-------PMQ----LFAGALTMPMTQIPPNHSIRLFLIFWLYFGLLICSAF 389
            .|...::.:.:.:|       |.:    .|:..:...:.:.|.:.|.|:.:..|....:.:.:.|
 Worm   207 GVIFLVMTNIIRKVYEEMTVTPFESIWVFFSIFVQQGLPEQPRSWSCRVLVALWWLASITLSATF 271

  Fly   390 KGNLTSMMVFQ----PYLPDINQLGALAR-SHYHIIIRPRHVKHIQHFLTLGHKHESRIREQMLE 449
            .|:|.::....    |: .:|:||..|.: ..:.|::                ...|..|.:|:.
 Worm   272 TGSLVALFAVDKTNVPF-QNIDQLVRLVKQGKFEIVM----------------DENSFTRTEMIA 319

  Fly   450 VSDTQMY-----EMMRNNDIRFAYLEKYHIARFQVNSRVHMHLGRPL----FHLMNSC------- 498
            .|...:|     ||:.|:.:::.......:|..:.|....: || |:    |:..:.|       
 Worm   320 RSKLPVYRDLWHEMIVNHKVKYVNGIARGVAFVRANPGYAL-LG-PMATLNFYAYSDCKVILFND 382

  Fly   499 -LVPFHAVYIVPYGSPYLGFLDSLIRSSHEFGFERYWDRIMNSAFIKSGVKV--VNRRRGSGNDE 560
             ::|.:....:...|.|..:..:.||...|.||.:.|     .|..:|.|.:  :|....:....
 Worm   383 GILPVYLSIPLVKNSIYSPYFSTKIREMVERGFTQKW-----IADYRSYVAMQKINECNSTTIGP 442

  Fly   561 PVVLKLQHFHAVFALWLVGIGMACIVLAWEHLTHNYNLAVTK 602
            ...|.|:.....|.::|.|.|:...:...|.:...:...:||
 Worm   443 KSYLDLKRAQGAFWVFLGGAGLGLALFVGEFIFKFFREKMTK 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir85aNP_649833.1 None
glr-8NP_001368711.1 PBP2_iGluR_ligand_binding 62..424 CDD:270219 59/305 (19%)

Return to query results.
Submit another query.