DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir85a and Grid1

DIOPT Version :10

Sequence 1:NP_649833.1 Gene:Ir85a / 41052 FlyBaseID:FBgn0037630 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_032192.2 Gene:Grid1 / 14803 MGIID:95812 Length:1009 Species:Mus musculus


Alignment Length:490 Identity:89/490 - (18%)
Similarity:162/490 - (33%) Gaps:165/490 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 VPTLEQLFPKTIPNMQRKPLRMCIYKDDV-----RAIFWRQGTILGTDGLLAAYVAERLNATMMI 246
            |..||:.|.....|:..:|.|...:..||     :|:.::.......||                
Mouse   442 VTVLEEPFVMVAENILGQPKRYKGFSIDVLDALAKALGFKYEIYQAPDG---------------- 490

  Fly   247 TRPHSYNNHNLSSDICFLEVAKEYVDVAMNIRFLVPDTFRKQAESTVSHTRD----DLCVIVPKA 307
              .:.:..||.|.:....|:..:..|:|::...:.|     :.||.|..::.    .:.:::.|.
Mouse   491 --RYGHQLHNTSWNGMIGELISKRADLAISAITITP-----ERESVVDFSKRYMDYSVGILIKKP 548

  Fly   308 KTAPTFWNIFRSFGSLVWALILVSVLVANVFCYIL------KSEVGRVP-----------MQLFA 355
            :...:.:::|..|...|||.|..::.|..|..::|      :|:....|           :.:..
Mouse   549 EEKISIFSLFAPFDFAVWACIAAAIPVVGVLIFVLNRIQAVRSQSATQPRPSASATLHSAIWIVY 613

  Fly   356 GALTMPMTQIPPNH-SIRLFLIFWLYFGLLICSAFKGNLTSMMVFQPYLPDINQLGALARSHYHI 419
            ||......:...|. ::|:.:..|..|.|::||::..||.:                        
Mouse   614 GAFVQQGGESSVNSVAMRIVMGSWWLFTLIVCSSYTANLAA------------------------ 654

  Fly   420 IIRPRHVKHIQHFLTLGHKHESRIR-----EQMLEVS-----DTQMYEMMR-------NNDIRFA 467
                        |||:. :.::.||     .:.||:|     |:.:||..|       ..|..||
Mouse   655 ------------FLTVS-RMDNPIRTFQDLSKQLEMSYGTVRDSAVYEYFRAKGTNPLEQDSTFA 706

  Fly   468 YLEKYHIARFQVNSRVHMHLGRP-----------LFHLMNSCLVPFHAV---------------- 505
            .|.:    ....|......:..|           ...|.:..:|.:.|:                
Mouse   707 ELWR----TISKNGGADNCVSNPSEGIRKAKKGNYAFLWDVAVVEYAALTDDDCSVTVIGNSISS 767

  Fly   506 ----YIVPYGSPYLGFLDSLIRSSHEFG-----FERYW------DRIMNSAFIKSGVKVVNRRRG 555
                ..:.:||||.......|....:.|     .:::|      |...:|               
Mouse   768 KGYGIALQHGSPYRDLFSQRILELQDTGDLDVLKQKWWPHTGRCDLTSHS--------------- 817

  Fly   556 SGNDEPVVLKLQHFHAVFALWLVGIGMACIVLAWE 590
            |...|...|||..|..||.:..:|:.:||:|.|.|
Mouse   818 STQTEGKSLKLHSFAGVFCILAIGLLLACLVAALE 852

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir85aNP_649833.1 None
Grid1NP_032192.2 Interaction with CBLN1. /evidence=ECO:0000269|PubMed:27418511 21..436
PBP1_iGluR_delta_1 25..425 CDD:380615
PBP2_iGluR_delta_1 436..806 CDD:270448 72/427 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 931..960
Blue background indicates that the domain is not in the aligned region.

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