DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir85a and grin2cb

DIOPT Version :10

Sequence 1:NP_649833.1 Gene:Ir85a / 41052 FlyBaseID:FBgn0037630 Length:605 Species:Drosophila melanogaster
Sequence 2:XP_009305071.3 Gene:grin2cb / 100333648 ZFINID:ZDB-GENE-100308-2 Length:1328 Species:Danio rerio


Alignment Length:653 Identity:111/653 - (16%)
Similarity:244/653 - (37%) Gaps:237/653 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 HEHTGQILKEVTKCDISNQNTPLEAVKDDGILMYMVMITTNISQPLELSLIRKKSAAKHRSHVFL 126
            |:|.|.|.:..:.|     ::|:::..::.:..:|:    |:|.             :|      
Zfish   313 HKHRGFIPEGHSDC-----SSPVKSYANNSLFRHML----NVSW-------------EH------ 349

  Fly   127 LVRDADTVSDAWMRASFRQFWKIWLLNIVIL------YW-----RDGRLNAYRYN--PFMDNYLI 178
              :|....||.::...          ::||:      :|     .:|.:...||.  |...::|.
Zfish   350 --KDLSFNSDGYLTNP----------SMVIIALDRENHWDKVGSYEGGILQMRYPVWPRYGSFLE 402

  Fly   179 PV-DNKPNEVPTLEQLFPKTIPNMQRKPLRMCIYKDDVRAIFWRQGTILGTDGLLAAYVAERLNA 242
            || ||:...|.|||:           :|..:      |.::....||.: .:.:.....:.|..:
Zfish   403 PVSDNRHLTVATLEE-----------RPFVI------VESVDPATGTCV-RNTVPCRRQSNRTES 449

  Fly   243 TMMITRPHSYNNHNLSSDIC----FLEVAKEYVDVAMNIRF----------------------LV 281
            .:..|.|:        :.:|    .:::.|:   ::..|:|                      ::
Zfish   450 IIGHTEPY--------TKLCCKGFCIDILKK---LSRTIKFSYDLYLVTNGKHGKMVRGVWNGMI 503

  Fly   282 PDTFRKQAES-----TVSHTRDDLC-VIVPKAKTAPTFWNIFRSFGSL------------VWALI 328
            .:.|.|:|:.     |::..|.::. ..||..:|..:.. :.||.|::            ||.::
Zfish   504 GEVFYKRADMAIGSLTINEERSEIVDFSVPFVETGISVM-VARSNGTVSPSAFLEPYSPAVWVMM 567

  Fly   329 LV---SVLVANVFCYILKSEVG--------RVP----------MQLFAGAL---TMPMTQIPPNH 369
            .|   :|:...||.:...|.||        :.|          :.|..|.:   ::|: :.|...
Zfish   568 FVMCLTVVAVTVFVFEYFSPVGYNRSLVSAKAPGGPTFTIGKSVWLLWGIVFNNSVPI-ENPKGT 631

  Fly   370 SIRLFLIFWLYFGLLICSAFKGNLTSMMVFQPYLPDINQLGALARSHYHIIIRPRHVKHIQHFLT 434
            :.::.::.|.:|.::..:::..||.:.|:.:.|   |:.:..|:...:.   :|:          
Zfish   632 TSKIMVLVWAFFAVIFLASYTANLAAFMIQEQY---IDTVSGLSDKKFQ---KPQ---------- 680

  Fly   435 LGHKHESRIREQMLEVSDTQMYEMMRNNDIRFAYLEKY-HIARFQ-------VNSRVHMHLGRPL 491
               :|....|...:....|:     ||  ||..|.:.: |:.::.       :||   :..|:..
Zfish   681 ---EHYPPFRFGTVPNGSTE-----RN--IRSNYPDMHTHMIKYNQKGVEEALNS---LKTGKLD 732

  Fly   492 FHLMNSCLVPFHA-----VYIVPYGSPYL----GFLDSLIRSSHEFGFERYWDRIMNSAFIK--- 544
            ..:.::.::.:.|     ..:|..||..:    |:..:|.:.|.       |.|.::.|.::   
Zfish   733 AFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSR-------WKRPIDLALLQFLG 790

  Fly   545 ------------SGV------KVVNRRRGSGNDEPVVLKLQHFHAVFALWLVGIGMACIVLAWEH 591
                        ||:      :|::.:          |.:.:...||.:.||.:|::.:|.||||
Zfish   791 DGDTQRLETVWLSGICQNEKNEVMSSK----------LDIDNMAGVFYMLLVAMGLSLLVFAWEH 845

  Fly   592 LTH 594
            |.:
Zfish   846 LLY 848

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