| Sequence 1: | NP_001262373.1 | Gene: | 5-HT2B / 41017 | FlyBaseID: | FBgn0261929 | Length: | 947 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_077341.2 | Gene: | Htr6 / 64354 | RGDID: | 62044 | Length: | 438 | Species: | Rattus norvegicus |
| Alignment Length: | 279 | Identity: | 96/279 - (34%) |
|---|---|---|---|
| Similarity: | 138/279 - (49%) | Gaps: | 29/279 - (10%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 69 PFDANNYW--ALLALVLVLGTAAGNILVCLAIAWERRLQNVTNYFLMSLAITDLMVAVLVMPLGI 131
Fly 132 LTLVKGYFPLGSEHCLTWICLDVLFCTASIMHLCTISVDRYLSLRYPMRFGRNKTRRRVTLKIVF 196
Fly 197 VW-LLSIAMSLPLSL-MYSKNHASVLVNGTCQIPDPV-YKLVGSIVCFYIPLGVMLLTYCLTVRL 258
Fly 259 LARQRQNLGGGQQTAAATPGWASGWLG--QAPALERRCTWRRLLKPGPGNASS----VLHAHSAN 317
Fly 318 STDTDLSTLDN--HELWLP 334 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| 5-HT2B | NP_001262373.1 | 7tmA_5-HT2_insect-like | 74..>267 | CDD:320433 | 75/197 (38%) |
| TM helix 1 | 75..101 | CDD:320433 | 12/27 (44%) | ||
| TM helix 2 | 108..134 | CDD:320433 | 13/25 (52%) | ||
| TM helix 3 | 146..176 | CDD:320433 | 17/29 (59%) | ||
| TM helix 4 | 188..211 | CDD:320433 | 9/24 (38%) | ||
| TM helix 5 | 229..258 | CDD:320433 | 10/29 (34%) | ||
| 7tm_GPCRs | <799..893 | CDD:475119 | |||
| TM helix 6 | 818..840 | CDD:410628 | |||
| TM helix 7 | 854..879 | CDD:410628 | |||
| Htr6 | NP_077341.2 | 7tmA_5-HT6 | 29..331 | CDD:320182 | 94/271 (35%) |
| TM helix 1 | 29..54 | CDD:320182 | 11/25 (44%) | ||
| TM helix 2 | 61..87 | CDD:320182 | 13/25 (52%) | ||
| TM helix 3 | 99..129 | CDD:320182 | 17/29 (59%) | ||
| TM helix 4 | 141..164 | CDD:320182 | 8/22 (36%) | ||
| TM helix 5 | 185..214 | CDD:320182 | 11/30 (37%) | ||
| TM helix 6 | 261..291 | CDD:320182 | 6/23 (26%) | ||
| TM helix 7 | 299..324 | CDD:320182 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||