Protein Alignment Poxm and sv

DIOPT Version :10

• Sequence 1: NP_001036687.1
• Gene: Poxm / 40990
• FlyBaseID: FBgn0003129
• Length: 370
• Species: Drosophila melanogaster
• Sequence 2: NP_524633.3
• Gene: sv / 43825
• FlyBaseID: FBgn0005561
• Length: 844
• Species: Drosophila melanogaster
• Alignment Length: 246
• Identity: 111/246 - (45%)
• Similarity: 144/246 - (58%)
• Gaps: 53/246 - (21%)

  Fly    10 YGEVNQLGGVFVNGRPLPNATRMRIVELARLGIRPCDISRQLRVSHGCVSKILARYHETGSILPG 74
            :|.|||||||||||||||:..|.||||||..|:||||||||||||||||||||:||:||||...|
  Fly   176 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSRYYETGSFKAG 240

  Fly    75 AIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKTNVPSVSSISRILRNKLGSL 139
            .||||||:|.||.||:.|...|:.:|.:||||||||||:|.||.:.||||||||:||:|||....
  Fly   241 VIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQDNVPSVSSINRIVRNKAAEK 305

  Fly   140 G---HQHTPGTVMGSGSSSGGGSVSSNG-GQNNGT----------SASNNINLSNLGNPGGGPHH 190
            .   |.|....|   ..|.|||.:::.. ..:.||          |::|::|
  Fly   306 AKHVHHHQQHHV---SQSLGGGHIATESVDSSTGTIGEPQPPTSNSSANSVN------------- 354

  Fly   191 PHHHHHHQSAAAAASAH----------------HVHAHAHAHAHLYNSIYQ 225
                   .:.:|:||.|                |::|:::...|:.::..|
  Fly   355 -------TNVSASASVHASIPTSGTDSVQVSVGHINANSNETTHINSTAEQ 398

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Poxm	NP_001036687.1	PAX	10..133	CDD:128645	88/122 (72%)
sv	NP_524633.3	PAX	175..299	CDD:128645	88/122 (72%)