DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Poxm and CG11294

Sequence 1:NP_001036687.1 Gene:Poxm FlyBaseID:FBgn0003129 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_001259352.1 Gene:CG11294 FlyBaseID:FBgn0030058 Length:261 Species:Drosophila melanogaster

Alignment Length:129 Identity:36/130 (28%)
Similarity:48/130 (37%) Gaps:34/130 (26%)


  Fly   138 SLGHQHTPGTVMGSGSSSGGGSVSSNGG--------QNNGTSASNNINLSNLGN-PGGGPH---H 190
            |||   || .|||.|:..||   |.||.        ..|.:|||.:..|:.:|| |..|..   |
  Fly    98 SLG---TP-PVMGGGAVQGG---SGNGATARPPSQTPENLSSASKDSELAEVGNGPNSGSFTMMH 155

  Fly   191 PHHHHHHQSAAAAASAHHVHAHAHAHAHLYNSIYQPYSAAAAYSMKTPCGSPSPPQGAGGQGSV 254
            |.....||      ...|   ..|..|...:.:.:.|:....|.      :||.....||..::
  Fly   156 PAFQQQHQ------QQQH---QGHQQATDQDKLSKTYTELKLYK------APSHGMELGGMAAL 204

Known Domains:


GeneSequenceDomainRegion External IDIdentity
PoxmNP_001036687.1 PAX 10..133 CDD:128645
CG11294NP_001259352.1 Homeobox 29..80 CDD:278475
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C124286799
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
10.930

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